Gene
| Gene Model ID | pfu_aug2.0_402.1_07459 |
|---|---|
| Locus | scaffold402.1 : 88743 ... 110285 : - |
| To GenomeBrowser | scaffold402.1:88743..110285 |
| Genes list of scaffold | scaffold402.1 |
| Synonym | pfu_aug1.0_3121.1_51899 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_402.1_07459.t1 | 1 | 1 | SEP | 280 | 339 | 9.0e-15 | 54.7 | 6.2e-18 | 2.3e-14 | 53.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_402.1_07459.t1 | gi|676464976|ref|XP_009057094.1| | hypothetical protein LOTGIDRAFT_233217 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_402.1_07459.t1 | gi|524905756|ref|XP_005108241.1| | PREDICTED: UBX domain-containing protein 11-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_402.1_07459.t1 | gi|260808710|ref|XP_002599150.1| | hypothetical protein BRAFLDRAFT_225147 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_402.1_07459.t1 | gi|556971065|ref|XP_005994002.1| | PREDICTED: UBX domain-containing protein 11 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_402.1_07459.t1 | gi|591380645|ref|XP_007064864.1| | PREDICTED: UBX domain-containing protein 11 [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_402.1_07459.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_402.1_07459.t1 atgcctttcaggacaccagactattcagaggacgagagcaaactacttgatgagataacccacaacatggccacagctcg tctcaaaactcaccgagatcctttcgatgggggacttccaaaacttagtacaaataagtcacatgttggcgggaaccaga gtccttctccaaggctatcacaccccagcggtcccatgggttctgggccaagtgaccatgaattaatgaccgctatgatg acacggattggtttactggaacagaaactgaccactcaggccaaggacatcaatgataagtatattccctgtattccagg ttctgggccaagtgaccatgaattaatgaccgctatgatgacacggattggtttactggaacagaaactgaccactcagg ccaaggacatcaatgataaggataagaaaatcagagttctagaagataaagtgaaaatcatgcagaaagcacaaggtgat gtttcatcaaatcagactcatgagttagaaaagaaatgtttgttacttcagcagcaaatacatgaaatggaggcattcct ggctgattatggtatgatatgggtaggagagaagtcagaccctaagtcagaagtctacaatgatacatcatcaacacaaa gtagtggcagtgaggaggaggagtactggagacctgctacctccctgtcctcacataatgatacaccagatttcactatg gaatttaacaaagtgctagagaacataaaggatctgaatgtgttagccggggaaggtgtatcaaaagtacaacatactac agatggtgccagactcaagatgccagacgctgtgccgctcacactgtatgcaaatggcatagttatgtacagtggcccat tccggccctatgatgaccccagcacacagcaatgtatgcaggacataatggatggttactttcctacagaattacagaaa cgatacccagatgatcgcagagacgtcacattcaagacaaagagacaggacttatttacgggttctggtcaggtgctggg tggggagaccaaaccctcacgtctggtggaagacgttaaacattctggtgctgacaggtatagacagagctcctcaaagg ctacagccatagcaccagcaaacacaccagaaattacaccagaaaacaccaaaatcattagtgaaataccaggtcgcaag atgacggtgggacagtttcttgacaaattaccgaaatcagtaataaaaggtggcaaagttatagacataaggagttctat aggagatacattatcagggggtcaaaaagaaagtacaggagtgactgttgtagagactgattctgttttagatatgaaga aaagatgtatgattattttattttag |
|
Protein
| Protein ID | pfu_aug2.0_402.1_07459.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_402.1_07459.t1 MPFRTPDYSEDESKLLDEITHNMATARLKTHRDPFDGGLPKLSTNKSHVGGNQSPSPRLSHPSGPMGSGPSDHELMTAMM TRIGLLEQKLTTQAKDINDKYIPCIPGSGPSDHELMTAMMTRIGLLEQKLTTQAKDINDKDKKIRVLEDKVKIMQKAQGD VSSNQTHELEKKCLLLQQQIHEMEAFLADYGMIWVGEKSDPKSEVYNDTSSTQSSGSEEEEYWRPATSLSSHNDTPDFTM EFNKVLENIKDLNVLAGEGVSKVQHTTDGARLKMPDAVPLTLYANGIVMYSGPFRPYDDPSTQQCMQDIMDGYFPTELQK RYPDDRRDVTFKTKRQDLFTGSGQVLGGETKPSRLVEDVKHSGADRYRQSSSKATAIAPANTPEITPENTKIISEIPGRK MTVGQFLDKLPKSVIKGGKVIDIRSSIGDTLSGGQKESTGVTVVETDSVLDMKKRCMIILF |
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