Gene
| Gene Model ID | pfu_aug2.0_402.1_07461 |
|---|---|
| Locus | scaffold402.1 : 124026 ... 133859 : + |
| To GenomeBrowser | scaffold402.1:124026..133859 |
| Genes list of scaffold | scaffold402.1 |
| Synonym | pfu_aug1.0_38877.1_55686 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| eukaryotic translation initiation factor 2 subunit 3-like | GO:0003743 GO:0003924 GO:0005525 GO:0006413 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_402.1_07461.t1 | 1 | 1 | GTP_EFTU | 41 | 88 | 5.9e-08 | 32.3 | 1.8e-11 | 1.3e-07 | 31.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_402.1_07461.t1 | gi|676488022|ref|XP_009064482.1| | hypothetical protein LOTGIDRAFT_221777 [Lottia gigantea] | 2.00386e-43 |
| pfu_aug2.0_402.1_07461.t1 | gi|530574420|ref|XP_005281607.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 3 isoform X2 [Chrysemys picta bellii] | 4.00001e-41 |
| pfu_aug2.0_402.1_07461.t1 | gi|58332762|ref|NP_001011456.1| | eukaryotic translation initiation factor 2 subunit 3 [Xenopus (Silurana) tropicalis] | 4.99997e-41 |
| pfu_aug2.0_402.1_07461.t1 | gi|662206079|ref|XP_008476484.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 3-like, partial [Diaphorina citri] | 5.99994e-41 |
| pfu_aug2.0_402.1_07461.t1 | gi|554534889|ref|XP_005862171.1| | PREDICTED: eukaryotic translation initiation factor 2 subunit 3-like, partial [Myotis brandtii] | 5.99994e-41 |
Transcript
| Transcript ID | pfu_aug2.0_402.1_07461.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_402.1_07461.t1 atggctggcgaagtagaagagcaaccaaaaacgcttcaaccccatttatcaaagcaagatatcgaaacattaaatgtaca gaaattaacacctctgaccccagaggtcatcagtagacaggccacaataaatataggtactattggtcatgtggcccacg gaaagtctacagtagtaaaagccatatcaggtgtacagactgtcagatttaagaacgagttagtcagaaacattacaatc aaattaggatatgccaatgcaaagatctactgtttggatagttgtgagtga |
|
Protein
| Protein ID | pfu_aug2.0_402.1_07461.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_402.1_07461.t1 MAGEVEEQPKTLQPHLSKQDIETLNVQKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELVRNITI KLGYANAKIYCLDSCE |
|