Gene
| Gene Model ID | pfu_aug2.0_402.1_07463 |
|---|---|
| Locus | scaffold402.1 : 151328 ... 161935 : - |
| To GenomeBrowser | scaffold402.1:151328..161935 |
| Genes list of scaffold | scaffold402.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vesicle transport protein sft2b | GO:0016021 GO:0016192 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_402.1_07463.t1 | 1 | 1 | Got1 | 42 | 156 | 6.0e-31 | 107.0 | 3.7e-34 | 7.8e-31 | 106.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_402.1_07463.t1 | gi|676488010|ref|XP_009064478.1| | hypothetical protein LOTGIDRAFT_221769 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_402.1_07463.t1 | gi|524908786|ref|XP_005109483.1| | PREDICTED: vesicle transport protein SFT2B-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_402.1_07463.t1 | gi|524908784|ref|XP_005109482.1| | PREDICTED: vesicle transport protein SFT2B-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_402.1_07463.t1 | gi|195591904|ref|XP_002085676.1| | GD14898 [Drosophila simulans] | 0.0 |
| pfu_aug2.0_402.1_07463.t1 | gi|195348305|ref|XP_002040689.1| | GM22305 [Drosophila sechellia] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_402.1_07463.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_402.1_07463.t1 atggacaagctgaagaaggcattgagtggcgaagacgaggaagaatctgggatagtcactcagatatcggatgcatcatc attgagttgggagacgaggatcaaaggattcattgtttgttttgtattagggataatactctctgttttaggcagctgtt tactatggttgggctccaaaggattgattttatttgcagttttctatacatttggaaatcttctctcattagctagtaca tgtttcttgatgggaccagtgaaacaactgaaaaagatgtttgcaaagacgagagtcattgccacaattcttgtacttgt aatgtttgttttaactttggtgtgtgcatttgctctcaaaaatgcagcattgacattagtgtgctgtgtgttacaattta tagctttgacatggtactcattgtcatacatcccatacgctagagatgctgtgaagaaatgtttctcatcgtgtatagag tga |
|
Protein
| Protein ID | pfu_aug2.0_402.1_07463.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_402.1_07463.t1 MDKLKKALSGEDEEESGIVTQISDASSLSWETRIKGFIVCFVLGIILSVLGSCLLWLGSKGLILFAVFYTFGNLLSLAST CFLMGPVKQLKKMFAKTRVIATILVLVMFVLTLVCAFALKNAALTLVCCVLQFIALTWYSLSYIPYARDAVKKCFSSCIE |
|