Gene
| Gene Model ID | pfu_aug2.0_402.1_07470 |
|---|---|
| Locus | scaffold402.1 : 262111 ... 264629 : - |
| To GenomeBrowser | scaffold402.1:262111..264629 |
| Genes list of scaffold | scaffold402.1 |
| Synonym | pfu_aug1.0_3987.1_37766 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_402.1_07470.t1 | 16 | 1 | LRR_1 | 10 | 22 | 1.5e-19 | 67.0 | 2.8 | 4200.0 | -1.4 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 1 | LRR_4 | 16 | 36 | 8.6e-26 | 89.0 | 0.0045 | 6.7 | 6.4 |
| pfu_aug2.0_402.1_07470.t1 | 10 | 1 | LRR_8 | 20 | 59 | 8.99998e-41 | 137.4 | 4.2e-07 | 0.00062 | 19.4 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 1 | LRR_6 | 23 | 35 | 3.6e-11 | 41.9 | 0.046 | 68.0 | 3.9 |
| pfu_aug2.0_402.1_07470.t1 | 10 | 2 | LRR_8 | 24 | 83 | 8.99998e-41 | 137.4 | 1.5e-12 | 2.3e-09 | 36.8 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 2 | LRR_4 | 24 | 59 | 8.6e-26 | 89.0 | 6.7e-05 | 0.099 | 12.2 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 2 | LRR_1 | 24 | 46 | 1.5e-19 | 67.0 | 0.0076 | 11.0 | 6.4 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 1 | LRR_7 | 24 | 35 | 3.6e-10 | 38.3 | 0.42 | 620.0 | 1.4 |
| pfu_aug2.0_402.1_07470.t1 | 4 | 1 | LRR_5 | 25 | 81 | 2.4e-07 | 30.5 | 0.00039 | 0.57 | 9.8 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 2 | LRR_6 | 45 | 60 | 3.6e-11 | 41.9 | 0.0026 | 3.9 | 7.8 |
| pfu_aug2.0_402.1_07470.t1 | 10 | 3 | LRR_8 | 51 | 109 | 8.99998e-41 | 137.4 | 5.3e-12 | 7.9e-09 | 35.1 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 3 | LRR_4 | 51 | 83 | 8.6e-26 | 89.0 | 3.4e-05 | 0.05 | 13.2 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 3 | LRR_1 | 51 | 68 | 1.5e-19 | 67.0 | 0.005 | 7.5 | 7.0 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 2 | LRR_7 | 51 | 62 | 3.6e-10 | 38.3 | 0.25 | 370.0 | 2.1 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 3 | LRR_6 | 70 | 83 | 3.6e-11 | 41.9 | 0.0029 | 4.3 | 7.7 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 4 | LRR_4 | 72 | 110 | 8.6e-26 | 89.0 | 2.0e-05 | 0.029 | 13.9 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 4 | LRR_1 | 73 | 96 | 1.5e-19 | 67.0 | 0.0012 | 1.7 | 8.9 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 3 | LRR_7 | 73 | 91 | 3.6e-10 | 38.3 | 0.004 | 6.0 | 7.5 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 4 | LRR_6 | 98 | 109 | 3.6e-11 | 41.9 | 1.0 | 1500.0 | -0.2 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 5 | LRR_1 | 100 | 109 | 1.5e-19 | 67.0 | 0.37 | 540.0 | 1.3 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 4 | LRR_7 | 100 | 109 | 3.6e-10 | 38.3 | 0.24 | 360.0 | 2.1 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 5 | LRR_4 | 141 | 157 | 8.6e-26 | 89.0 | 0.0032 | 4.7 | 6.9 |
| pfu_aug2.0_402.1_07470.t1 | 10 | 4 | LRR_8 | 143 | 157 | 8.99998e-41 | 137.4 | 0.016 | 23.0 | 4.8 |
| pfu_aug2.0_402.1_07470.t1 | 4 | 2 | LRR_5 | 143 | 210 | 2.4e-07 | 30.5 | 0.00034 | 0.5 | 10.0 |
| pfu_aug2.0_402.1_07470.t1 | 10 | 5 | LRR_8 | 147 | 208 | 8.99998e-41 | 137.4 | 7.9e-09 | 1.2e-05 | 24.9 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 6 | LRR_4 | 147 | 194 | 8.6e-26 | 89.0 | 3.5e-05 | 0.052 | 13.1 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 6 | LRR_1 | 148 | 164 | 1.5e-19 | 67.0 | 0.0063 | 9.4 | 6.7 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 5 | LRR_6 | 148 | 158 | 3.6e-11 | 41.9 | 0.069 | 100.0 | 3.4 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 5 | LRR_7 | 148 | 160 | 3.6e-10 | 38.3 | 0.023 | 34.0 | 5.2 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 6 | LRR_7 | 177 | 192 | 3.6e-10 | 38.3 | 0.045 | 66.0 | 4.3 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 7 | LRR_1 | 178 | 198 | 1.5e-19 | 67.0 | 0.011 | 16.0 | 5.9 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 6 | LRR_6 | 178 | 190 | 3.6e-11 | 41.9 | 3.6 | 5300.0 | -1.9 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 7 | LRR_7 | 203 | 223 | 3.6e-10 | 38.3 | 10.0 | 15000.0 | -3.0 |
| pfu_aug2.0_402.1_07470.t1 | 10 | 6 | LRR_8 | 258 | 295 | 8.99998e-41 | 137.4 | 0.028 | 41.0 | 4.0 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 7 | LRR_4 | 258 | 301 | 8.6e-26 | 89.0 | 0.013 | 19.0 | 5.0 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 8 | LRR_1 | 258 | 276 | 1.5e-19 | 67.0 | 3.4 | 5100.0 | -1.7 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 7 | LRR_6 | 283 | 295 | 3.6e-11 | 41.9 | 2.1 | 3200.0 | -1.2 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 8 | LRR_4 | 284 | 308 | 8.6e-26 | 89.0 | 0.023 | 34.0 | 4.1 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 9 | LRR_1 | 284 | 296 | 1.5e-19 | 67.0 | 0.29 | 430.0 | 1.6 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 8 | LRR_7 | 285 | 292 | 3.6e-10 | 38.3 | 8.6 | 13000.0 | -2.5 |
| pfu_aug2.0_402.1_07470.t1 | 4 | 3 | LRR_5 | 292 | 317 | 2.4e-07 | 30.5 | 4.2 | 6200.0 | -3.2 |
| pfu_aug2.0_402.1_07470.t1 | 10 | 7 | LRR_8 | 373 | 430 | 8.99998e-41 | 137.4 | 6.9e-16 | 1.0e-12 | 47.6 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 9 | LRR_4 | 373 | 407 | 8.6e-26 | 89.0 | 1.6e-08 | 2.4e-05 | 23.8 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 10 | LRR_1 | 373 | 387 | 1.5e-19 | 67.0 | 0.005 | 7.5 | 7.0 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 8 | LRR_6 | 373 | 386 | 3.6e-11 | 41.9 | 0.13 | 200.0 | 2.5 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 9 | LRR_7 | 373 | 384 | 3.6e-10 | 38.3 | 0.0091 | 13.0 | 6.4 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 9 | LRR_6 | 393 | 406 | 3.6e-11 | 41.9 | 0.0032 | 4.7 | 7.5 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 10 | LRR_7 | 394 | 407 | 3.6e-10 | 38.3 | 0.0057 | 8.5 | 7.0 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 11 | LRR_1 | 395 | 414 | 1.5e-19 | 67.0 | 0.00013 | 0.19 | 11.8 |
| pfu_aug2.0_402.1_07470.t1 | 4 | 4 | LRR_5 | 395 | 488 | 2.4e-07 | 30.5 | 0.00016 | 0.23 | 11.1 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 10 | LRR_6 | 418 | 439 | 3.6e-11 | 41.9 | 0.0019 | 2.8 | 8.2 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 10 | LRR_4 | 419 | 432 | 8.6e-26 | 89.0 | 0.018 | 27.0 | 4.5 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 12 | LRR_1 | 419 | 436 | 1.5e-19 | 67.0 | 0.0056 | 8.4 | 6.8 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 11 | LRR_7 | 419 | 431 | 3.6e-10 | 38.3 | 0.06 | 89.0 | 4.0 |
| pfu_aug2.0_402.1_07470.t1 | 10 | 8 | LRR_8 | 430 | 483 | 8.99998e-41 | 137.4 | 1.3e-10 | 2.0e-07 | 30.6 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 11 | LRR_4 | 448 | 490 | 8.6e-26 | 89.0 | 1.6e-12 | 2.4e-09 | 36.5 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 13 | LRR_1 | 448 | 470 | 1.5e-19 | 67.0 | 3.3e-05 | 0.049 | 13.6 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 12 | LRR_7 | 448 | 463 | 3.6e-10 | 38.3 | 0.013 | 20.0 | 5.9 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 11 | LRR_6 | 449 | 460 | 3.6e-11 | 41.9 | 0.009 | 13.0 | 6.1 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 12 | LRR_6 | 471 | 486 | 3.6e-11 | 41.9 | 0.00094 | 1.4 | 9.2 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 13 | LRR_7 | 471 | 486 | 3.6e-10 | 38.3 | 0.00033 | 0.48 | 10.8 |
| pfu_aug2.0_402.1_07470.t1 | 10 | 9 | LRR_8 | 472 | 531 | 8.99998e-41 | 137.4 | 7.2e-08 | 0.00011 | 21.9 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 12 | LRR_4 | 472 | 510 | 8.6e-26 | 89.0 | 1.6e-09 | 2.3e-06 | 27.0 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 14 | LRR_1 | 472 | 487 | 1.5e-19 | 67.0 | 0.0027 | 4.0 | 7.8 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 15 | LRR_1 | 495 | 511 | 1.5e-19 | 67.0 | 0.00042 | 0.62 | 10.3 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 14 | LRR_7 | 495 | 509 | 3.6e-10 | 38.3 | 0.035 | 52.0 | 4.7 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 13 | LRR_6 | 496 | 509 | 3.6e-11 | 41.9 | 0.0018 | 2.6 | 8.3 |
| pfu_aug2.0_402.1_07470.t1 | 13 | 13 | LRR_4 | 524 | 533 | 8.6e-26 | 89.0 | 0.6 | 890.0 | -0.4 |
| pfu_aug2.0_402.1_07470.t1 | 16 | 16 | LRR_1 | 525 | 534 | 1.5e-19 | 67.0 | 0.89 | 1300.0 | 0.1 |
| pfu_aug2.0_402.1_07470.t1 | 14 | 14 | LRR_6 | 525 | 532 | 3.6e-11 | 41.9 | 10.0 | 15000.0 | -3.4 |
| pfu_aug2.0_402.1_07470.t1 | 10 | 10 | LRR_8 | 551 | 559 | 8.99998e-41 | 137.4 | 0.66 | 980.0 | -0.4 |
| pfu_aug2.0_402.1_07470.t1 | 1 | 1 | TIR | 642 | 750 | 1.4e-15 | 57.0 | 1.6e-18 | 2.3e-15 | 56.2 |
| pfu_aug2.0_402.1_07470.t1 | 1 | 1 | TIR_2 | 643 | 738 | 1.6e-14 | 53.8 | 2.1e-17 | 3.0e-14 | 52.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_402.1_07470.t1 | gi|524910915|ref|XP_005110330.1| | PREDICTED: toll-like receptor 13-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_402.1_07470.t1 | gi|524907183|ref|XP_005108716.1| | PREDICTED: toll-like receptor 3-like isoform X1 [Aplysia californica] | 5.60519e-45 |
| pfu_aug2.0_402.1_07470.t1 | gi|524883392|ref|XP_005098327.1| | PREDICTED: toll-like receptor 2-like [Aplysia californica] | 2.94273e-44 |
| pfu_aug2.0_402.1_07470.t1 | gi|524916680|ref|XP_005113112.1| | PREDICTED: toll-like receptor 3-like [Aplysia californica] | 1.0e-37 |
| pfu_aug2.0_402.1_07470.t1 | gi|524880416|ref|XP_005096872.1| | PREDICTED: toll-like receptor 3-like isoform X1 [Aplysia californica] | 7.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_402.1_07470.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_402.1_07470.t1 atgaatcgcactgtgtctgcaaattgcaataatttgaaccttactgcagttccaaataatctaccaaactctctggtgtc actttccttgagctataactcaatagcgatcatcgaaaacgaggacttttacaacctgacgtttattttgcacttggatc tttcttacaataaactcggatttcttcaacccaacagcttcatccgctgtcaagaactgcgtactctcgatctaagtcac aatgacctgtttctgaactctacgtcacttccgctagatattttccaacctcttaaacgtctccagtcattgtcgttaca tggcaatgcttatccattcttcgactatccagattattttctcggaaaactccatcttttagaaatcttacgtatggatg gaatccctgtaaactttggagccgaattttccaacatagaaaacctcagagaacttcatttgaatggaaatgatggaatc tgcattctgggcaatgtaacacaagatacatttcggtctttaaacaccactaaactagccgtgttagacgtaactcactg tcatattgaaaccatatcaaaatatgcattttcaatgctaaatcacctttcgaaactagtacttaatgaatttaagagcg gtctatcaaatttacaaaatgctttaacagggctagatatgacgaaaatagctgaactttacacatcaaaaatatacaaa aagcctatacccgtaacattaaatgacgagtttcgacccgtgatgaacacatccatacagaaattatacataacggacag tcatttgtacgacgtacgaccggaattcatagaattgctacccagaacaattcaagaattgtcccttcgcgacaacatac tatctaaagctaagtttctgcagaaaatgtctatgttaaacagcctaattaaagtagatgtaagcttccaacggcaatac accatgaccgaccaaataactgctccttctgaatttggcatattacaaagccacgacgacgatgtgcaactgccacccaa tttacagattgttgttgctagtcatttaaagcttggatatggctttgtacaggggacgggctttaaaccaaacatactac gcttcctagatctatcttgtaatgagttggaagtattgggcggagagtgggttggacttcacaacctccaggccctcaat ttatctcataaccaattcgaggtcattgaccatcgtttcttcagagatatgtacaacctaacacatttattccttggagg aaacaaacttaaggactctttgatgtccagactaggaaatcgaacactcgaatctcaggttagattacaacaccttgaca tgtcagataatgggatacgtggtctaccatcgggaatattcagtaatcttcataagcttacggtgcttcatctgaataac aattcactcacagatctggcctttctggcaggatcactggacagattgatctatttagatctctcatttaatcaattatc tgatataaacgataaagctaaacatgcacttcacgcaataggccatgttaccgttaatttacaaggaaatcctctgaagt gtacttgtggtcagttggcaacattaaattggttcgtaagaactaatgtttctttcaaaggtttaccatcattgacttgt caatcacagaatggctcgacagtaagactactaactttacttcatgaaatgcaacaagtagagattgaatgttggtcaat tgttattatgatttcatgcattatgacattccttgttttgagctttgttttaacaattatagctctaatgtattacaaga gatggcaaatcatttatatgtactactcaggaaagaagcatatcaatccatacggctacgaacaacttgaccaaacgtac gacgcgtatctttcctacagcgacattgcaaggccagtcgtgtccgcacttgtagacgatcttgaaagagaaggatataa cttgttcgtgccacatgtcgacataaaaccaggggagcgtgaatatgcagccatatctactgcaattcaaaacagttcct gtctgattgccttcttgacaaaggagtacattcagacagctgcaaatttgttcgagttcaatcttgctgtgtatgagggg attcgcagacgacagcagatgataatcccgattctcctgggaaacatcccctacacatcgctagataaagaactggtgac tttcttcaaggaaaatccttggtacagcttccaaaatcagcaagatatgtatgaattcatcaagacaaggataaaacagt ttacccgtaatagttaa |
|
Protein
| Protein ID | pfu_aug2.0_402.1_07470.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_402.1_07470.t1 MNRTVSANCNNLNLTAVPNNLPNSLVSLSLSYNSIAIIENEDFYNLTFILHLDLSYNKLGFLQPNSFIRCQELRTLDLSH NDLFLNSTSLPLDIFQPLKRLQSLSLHGNAYPFFDYPDYFLGKLHLLEILRMDGIPVNFGAEFSNIENLRELHLNGNDGI CILGNVTQDTFRSLNTTKLAVLDVTHCHIETISKYAFSMLNHLSKLVLNEFKSGLSNLQNALTGLDMTKIAELYTSKIYK KPIPVTLNDEFRPVMNTSIQKLYITDSHLYDVRPEFIELLPRTIQELSLRDNILSKAKFLQKMSMLNSLIKVDVSFQRQY TMTDQITAPSEFGILQSHDDDVQLPPNLQIVVASHLKLGYGFVQGTGFKPNILRFLDLSCNELEVLGGEWVGLHNLQALN LSHNQFEVIDHRFFRDMYNLTHLFLGGNKLKDSLMSRLGNRTLESQVRLQHLDMSDNGIRGLPSGIFSNLHKLTVLHLNN NSLTDLAFLAGSLDRLIYLDLSFNQLSDINDKAKHALHAIGHVTVNLQGNPLKCTCGQLATLNWFVRTNVSFKGLPSLTC QSQNGSTVRLLTLLHEMQQVEIECWSIVIMISCIMTFLVLSFVLTIIALMYYKRWQIIYMYYSGKKHINPYGYEQLDQTY DAYLSYSDIARPVVSALVDDLEREGYNLFVPHVDIKPGEREYAAISTAIQNSSCLIAFLTKEYIQTAANLFEFNLAVYEG IRRRQQMIIPILLGNIPYTSLDKELVTFFKENPWYSFQNQQDMYEFIKTRIKQFTRNS |
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