Gene
| Gene Model ID | pfu_aug2.0_4023.1_12566 |
|---|---|
| Locus | scaffold4023.1 : 36955 ... 49292 : - |
| To GenomeBrowser | scaffold4023.1:36955..49292 |
| Genes list of scaffold | scaffold4023.1 |
| Synonym | pfu_aug1.0_11.1_50544 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tgf-beta receptor type- partial | GO:0000186 GO:0001525 GO:0001822 GO:0001824 GO:0001837 GO:0001937 GO:0002088 GO:0004702 GO:0005025 GO:0005114 GO:0005524 GO:0005768 GO:0005901 GO:0005923 GO:0007179 GO:0007507 GO:0008284 GO:0008354 GO:0008584 GO:0009791 GO:0009952 GO:0010862 GO:0016021 GO:0016323 GO:0016324 GO:0018105 GO:0018107 GO:0030199 GO:0030307 GO:0031396 GO:0031625 GO:0032331 GO:0032403 GO:0043235 GO:0043393 GO:0043542 GO:0043627 GO:0045602 GO:0045893 GO:0046777 GO:0046872 GO:0046982 GO:0048538 GO:0048663 GO:0048701 GO:0048844 GO:0050431 GO:0051272 GO:0051491 GO:0051897 GO:0060017 GO:0060021 GO:0060037 GO:0060391 GO:0070411 GO:0070723 GO:2001235 GO:2001237 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4023.1_12566.t1 | 1 | 1 | Pkinase | 17 | 137 | 4.0e-15 | 55.6 | 6.7e-19 | 5.0e-15 | 55.3 |
| pfu_aug2.0_4023.1_12566.t1 | 1 | 1 | Pkinase_Tyr | 21 | 138 | 3.6e-09 | 36.0 | 7.2e-13 | 5.3e-09 | 35.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4023.1_12566.t1 | gi|12840504|dbj|BAB24865.1| | unnamed protein product [Mus musculus] | 0.0 |
| pfu_aug2.0_4023.1_12566.t1 | gi|602670065|ref|XP_007440564.1| | PREDICTED: TGF-beta receptor type-1-like, partial [Python bivittatus] | 0.0 |
| pfu_aug2.0_4023.1_12566.t1 | gi|524893745|ref|XP_005103381.1| | PREDICTED: TGF-beta receptor type-1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_4023.1_12566.t1 | gi|704291059|ref|XP_010176185.1| | PREDICTED: TGF-beta receptor type-1 [Caprimulgus carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4023.1_12566.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4023.1_12566.t1 gcttggcagtacggcacgacccgatcaaggattctgtcgacctcgctccgtcagacagagtgggaacaaagcggtatatg gcaccagaagttctcgatggttcgatcaatatgaaccattttgagtcgtttaagagaggtgatgtctattcgtttggttt agtattatgggagattacaaggagatgttcagttggaggtatagttgaggactaccagctcccattctgggacatcgtgc catctgacccgagcctagaggagatgagaaaagttgtatgtgatgatcgtcaacgacccggcgtccctaacagatggcag actattgagagtctacgggtaatggctcgcctgatgaaagaatgctggtatcagaaccccgcagcaagactgactacgct acgtatcaaaaagacgttaaccagtctcgctcaagcagaggaccttaaggaatacaaaaacatttaa |
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Protein
| Protein ID | pfu_aug2.0_4023.1_12566.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4023.1_12566.t1 LAVRHDPIKDSVDLAPSDRVGTKRYMAPEVLDGSINMNHFESFKRGDVYSFGLVLWEITRRCSVGGIVEDYQLPFWDIVP SDPSLEEMRKVVCDDRQRPGVPNRWQTIESLRVMARLMKECWYQNPAARLTTLRIKKTLTSLAQAEDLKEYKNI |
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