Gene
| Gene Model ID | pfu_aug2.0_403.1_10732 |
|---|---|
| Locus | scaffold403.1 : 1 ... 15687 : + |
| To GenomeBrowser | scaffold403.1:1..15687 |
| Genes list of scaffold | scaffold403.1 |
| Synonym | pfu_aug1.0_24105.1_69612 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_403.1_10732.t1 | 1 | 1 | ubiquitin | 68 | 127 | 1.0e-06 | 27.9 | 1.5e-09 | 2.4e-06 | 26.8 |
| pfu_aug2.0_403.1_10732.t1 | 3 | 1 | UBA | 295 | 330 | 2.7e-19 | 68.4 | 5.7e-10 | 9.4e-07 | 28.4 |
| pfu_aug2.0_403.1_10732.t1 | 3 | 2 | UBA | 370 | 401 | 2.7e-19 | 68.4 | 4.4e-05 | 0.073 | 12.9 |
| pfu_aug2.0_403.1_10732.t1 | 3 | 3 | UBA | 422 | 458 | 2.7e-19 | 68.4 | 3.5e-09 | 5.7e-06 | 26.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_403.1_10732.t1 | gi|585692314|ref|XP_006821424.1| | PREDICTED: NEDD8 ultimate buster 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_403.1_10732.t1 | gi|196000891|ref|XP_002110313.1| | hypothetical protein TRIADDRAFT_54183 [Trichoplax adhaerens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_403.1_10732.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_403.1_10732.t1 gagcttatacaacggtattctacagagttaaagctctcggaggaggaggttgaagatgctatagagtgcctcagaagtca tgccgtacaaaagcttgccgagagggaacgatttcaaaaggagggattggcaacactgaaagtgaaagtagcaggaaaat caggaaatcttacctatggaaatgacaagagaaagaccacgactgagagtatagagatcccgctgctgtcacttggatct gaattacggaaacttctgtctcagaaaatagaagtaccagaggaacagttaaaactgatttgtcagggccacgttatacg tcctgaccaatgtttgagggaacaaaatgtgaagcatggaagccagatgatgtgtcttgtcctcactgaaacggaggcag agtcagccagaaaggaggcggagcttaatcatttgatgtcaactcgacaggctgcagagctgctgtcagatagggcagaa aaagatgatgatgcatttggaatacagatagctgatcaatcagggcgccctctacaattacctgcggaggaaagaaaggc attaacactggttatgacgctgcatgaaaaaggaagagtggccgtgaaaagaggagaaattgccaaagccttactgctgt tattagaagcagacaaagaattcaggaagtgtagggcagatatattgaatgccgtagataactatgccgtactatgcctg gacattgcatggtgctatctctgccttaaaaatattgaacaccttcctgatgctgatgagagacttcagtcttgtgagga ctgctttaacagaagttatggaagtaacctagaaagattgtctgctcttaaggcgagtggtgagttagggcagctacaag tggattcagataaactagctcaagttattggaatgggcttcaaggaacaagaggcccggttaggtttgagagcctcccgt ggtgatattgaaagggcagtgcaacacattatgcaaaggagagaggaaaaagctgagataggaaaaaaagtgaaagaaga gagaagaaaaaagaaattacagaaagatttaggaaagacagcgtccggtgaattgataaatgtggacaactatgagatgc tgattggtatggggttcaacaagggagcatcagctgaggcactgagacaagctaataatgatatcagtgcagcactggaa gtattacaaaatcatccagagttactgtccttgcctgaccctgccccgtccccaggccagtcaatcactgacgagatgat ttctacagtggttggacttggttttgatgcagaaatggcgcgtagggctctccagcagtttgacagtaacatacaacgag ctatagacgcactgatacagaacggaggcttcctggcgccctcgcctacagaatcagggggcagtaactctgattccggt gcctcaagcagctcttctgaagatgataaattgaagaagcagcaagaagaagagaagattcgagatttggtgtcagacat tccacaagacgaggaagattatttagacctgaagcttgacgaagaggctcacatattacaggagtacatggggcttttgc agagtgttttatctacaaagcagtga |
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Protein
| Protein ID | pfu_aug2.0_403.1_10732.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_403.1_10732.t1 ELIQRYSTELKLSEEEVEDAIECLRSHAVQKLAERERFQKEGLATLKVKVAGKSGNLTYGNDKRKTTTESIEIPLLSLGS ELRKLLSQKIEVPEEQLKLICQGHVIRPDQCLREQNVKHGSQMMCLVLTETEAESARKEAELNHLMSTRQAAELLSDRAE KDDDAFGIQIADQSGRPLQLPAEERKALTLVMTLHEKGRVAVKRGEIAKALLLLLEADKEFRKCRADILNAVDNYAVLCL DIAWCYLCLKNIEHLPDADERLQSCEDCFNRSYGSNLERLSALKASGELGQLQVDSDKLAQVIGMGFKEQEARLGLRASR GDIERAVQHIMQRREEKAEIGKKVKEERRKKKLQKDLGKTASGELINVDNYEMLIGMGFNKGASAEALRQANNDISAALE VLQNHPELLSLPDPAPSPGQSITDEMISTVVGLGFDAEMARRALQQFDSNIQRAIDALIQNGGFLAPSPTESGGSNSDSG ASSSSSEDDKLKKQQEEEKIRDLVSDIPQDEEDYLDLKLDEEAHILQEYMGLLQSVLSTKQ |
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