Gene
| Gene Model ID | pfu_aug2.0_403.1_10736 |
|---|---|
| Locus | scaffold403.1 : 144156 ... 181489 : - |
| To GenomeBrowser | scaffold403.1:144156..181489 |
| Genes list of scaffold | scaffold403.1 |
| Synonym | pfu_aug1.0_16140.1_03676 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| low quality protein: frizzled-5-like | GO:0000578 GO:0001944 GO:0003002 GO:0004888 GO:0009966 GO:0010604 GO:0012505 GO:0016020 GO:0019899 GO:0031325 GO:0042127 GO:0043010 GO:0043231 GO:0044260 GO:0044444 GO:0048468 GO:0048646 GO:0060070 GO:0080090 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_403.1_10736.t1 | 1 | 1 | Fz | 37 | 149 | 5.9e-35 | 120.1 | 2.2e-38 | 1.6e-34 | 118.7 |
| pfu_aug2.0_403.1_10736.t1 | 1 | 1 | Frizzled | 254 | 560 | 0.0 | 464.5 | 0.0 | 0.0 | 463.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_403.1_10736.t1 | gi|524872866|ref|XP_005093188.1| | PREDICTED: LOW QUALITY PROTEIN: frizzled-5-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_403.1_10736.t1 | gi|676439684|ref|XP_009048933.1| | hypothetical protein LOTGIDRAFT_200873, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_403.1_10736.t1 | gi|632952124|ref|XP_007891677.1| | PREDICTED: frizzled-8 isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_403.1_10736.t1 | gi|632952122|ref|XP_007891676.1| | PREDICTED: frizzled-8 isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_403.1_10736.t1 | gi|556973833|ref|XP_005994866.1| | PREDICTED: frizzled-8 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_403.1_10736.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_403.1_10736.t1 atggcaattttacactcgtctccgggatgtgtacttttagtattaggggtattaactttggcatgtttgaattgctggtt agaagtgaatggcgaagacgatcgacgatgtcaagatatcaccatacccatgtgtaaaggaatcgggtataaccttacgt acatgcccaaccagttcaatcatgagacgcaagaagaagctgggttagaagtccatcagttttggccattagtggagatt cagtgttcaccggatctgaagcttttcctatgcagtatgtacactccaatctgtatgccgacgtacaagaagccacttcc ggcatgtcggtccgtctgtgagcgcgctaaggaaggatgcgctcctctgatggcgcaatatggattccaatggccggaaa gaatgaagtgtgagaatttaccggaatatggaacggaggtttgcatggatccgaataacaccgaaaaatctacaccgtca tcaaccaagggagacgggcatacacataaacctcacggtcataataaaccggacaccaaaccgaagaatcctgtgaaatc gaagaatccgctaaaaccgcacataccggatattacgggttataccgttcggccgaatggcgggattttcgattttcacg acgtcgcaagtaaagcttgccagtgttcgtgtaagatggtgaccttgcctaaaaccagtgcgtactacaacaaaattacc acgggtggaatcagtaactgcgcattgaactgtaccagcccatatttcaatgatgatgaaatgacatttgcgaccttctg ggtcggattgtggtcgattttgtgttgtattgcaacggccatgacggtactgacatttttcgttgacatgcaaagattca agtacccagagcgccctatcgtattcctaagcggctgttatttcatggtaagcataggctacattattcggctcatcgtc ggccatcaggcggtggcatgcgacggaaattcaatccgttacgaaacaacaggacctgcgctgtgcacggtagtcttctt actgatttactttttcggaatggcgtcatccatttggtgggtgattttatcgtttacgtggttcctgtctgcaggtttga agtggggacaggaagccatcgccagctattcccagtactttcatctcgccgcttggctagtcccttctgtaaagagcatc gccgtactagcgatgtcatcggtggacggtgacgcaatttccggtatatgctacgtcggaaatcaaaatctgaacaatct ccgaggctttgtcattgcgccattgtttgtttatttactcctcggcacttccttcctggttgcaggatttgtctcccttt tccggatccgaaacgtaatcaaacaacagggtcgtggaacgactgataaacttgaaaaactgatgatccggatcggagtt ttttcggtgctttataccgtgccagcaacgattgtgattggttgttatttttatgaacaacatctcaaagaaaaatggga attatcgagaaattgtaactgtttggaaaatgtatataaaccaaattatgccgtttttatgttgaaatactttatgtgtt tagtcgtgggtattacttccggtttctggatttggaccggaaagactcttcagtcatggaggaaattatttaactgttgt cgaaatacaaatgatagctttacgtcaaagcacacaaagtcaacgaactactcttatccaggtgtcaaagcggtaccgct tagtcaggtttag |
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Protein
| Protein ID | pfu_aug2.0_403.1_10736.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_403.1_10736.t1 MAILHSSPGCVLLVLGVLTLACLNCWLEVNGEDDRRCQDITIPMCKGIGYNLTYMPNQFNHETQEEAGLEVHQFWPLVEI QCSPDLKLFLCSMYTPICMPTYKKPLPACRSVCERAKEGCAPLMAQYGFQWPERMKCENLPEYGTEVCMDPNNTEKSTPS STKGDGHTHKPHGHNKPDTKPKNPVKSKNPLKPHIPDITGYTVRPNGGIFDFHDVASKACQCSCKMVTLPKTSAYYNKIT TGGISNCALNCTSPYFNDDEMTFATFWVGLWSILCCIATAMTVLTFFVDMQRFKYPERPIVFLSGCYFMVSIGYIIRLIV GHQAVACDGNSIRYETTGPALCTVVFLLIYFFGMASSIWWVILSFTWFLSAGLKWGQEAIASYSQYFHLAAWLVPSVKSI AVLAMSSVDGDAISGICYVGNQNLNNLRGFVIAPLFVYLLLGTSFLVAGFVSLFRIRNVIKQQGRGTTDKLEKLMIRIGV FSVLYTVPATIVIGCYFYEQHLKEKWELSRNCNCLENVYKPNYAVFMLKYFMCLVVGITSGFWIWTGKTLQSWRKLFNCC RNTNDSFTSKHTKSTNYSYPGVKAVPLSQV |
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