Gene
| Gene Model ID | pfu_aug2.0_403.1_10738 |
|---|---|
| Locus | scaffold403.1 : 263050 ... 264025 : + |
| To GenomeBrowser | scaffold403.1:263050..264025 |
| Genes list of scaffold | scaffold403.1 |
| Synonym | pfu_aug1.0_604.1_00419 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_403.1_10738.t1 | 1 | 1 | 7tm_1 | 1 | 246 | 1.7e-19 | 69.9 | 9.8e-23 | 2.1e-19 | 69.6 |
| pfu_aug2.0_403.1_10738.t1 | 1 | 1 | 7TM_GPCR_Srw | 2 | 262 | 2.3e-15 | 56.5 | 1.4e-18 | 2.9e-15 | 56.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_403.1_10738.t1 | gi|676432124|ref|XP_009046472.1| | hypothetical protein LOTGIDRAFT_110771 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_403.1_10738.t1 | gi|676432349|ref|XP_009046545.1| | hypothetical protein LOTGIDRAFT_157036 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_403.1_10738.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_403.1_10738.t1 atgcagacatccaccaacgcctttctctctgctctggctgtggccgacataatcaaattaaccaatgacattctgtattt cttcgttctgttgttaatgagaatcgacaaggacgcagcacagactgcatacgttcacatatatccacaagcgcacttta tcttcaatttttcattatgtgtatcgtcatggctaactgttacagtggcagtggagagattcatcttggtttgttttcct acaaaagccaaattcatctgcacaaggagtcgcgctatcatcacatgtgttattgtgtatctagtaatggtttgcttctc gctgccatgtgccttccgatacaagacaatttacgtttacaacaacgaaacgggtgcgacaattcaagatttagaagtca gtgaaatgtggtcggacaaatatttcgttaccatatacacatggatcctaaattcattacgatgtaatattcccttgttc atactcatcattctcaacacatgtattatatgctcaatgaggaaagcgcgcgctaaaaagaacaattcccgccgaaaccg agttacattcatgatgattacgatcataatgtgctttcttgtttttacgacaccagacgctataatgtcaacatttttga agtacgggtaccacgaggccaataattacgtgaagggaatgagggagtttacagacactctactgacagtcaatgctgct gttaattttatcatctattgctggtttggttatactttccgacaaaacttcaagaaactgttctgtcaacgaccctctcg tggaaaggaggtgttcgtgtaa |
|
Protein
| Protein ID | pfu_aug2.0_403.1_10738.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_403.1_10738.t1 MQTSTNAFLSALAVADIIKLTNDILYFFVLLLMRIDKDAAQTAYVHIYPQAHFIFNFSLCVSSWLTVTVAVERFILVCFP TKAKFICTRSRAIITCVIVYLVMVCFSLPCAFRYKTIYVYNNETGATIQDLEVSEMWSDKYFVTIYTWILNSLRCNIPLF ILIILNTCIICSMRKARAKKNNSRRNRVTFMMITIIMCFLVFTTPDAIMSTFLKYGYHEANNYVKGMREFTDTLLTVNAA VNFIIYCWFGYTFRQNFKKLFCQRPSRGKEVFV |
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