Gene
| Gene Model ID | pfu_aug2.0_403.1_10739 |
|---|---|
| Locus | scaffold403.1 : 307525 ... 314520 : + |
| To GenomeBrowser | scaffold403.1:307525..314520 |
| Genes list of scaffold | scaffold403.1 |
| Synonym | pfu_aug1.0_5151.1_30881 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_403.1_10739.t1 | 1 | 1 | RVT_1 | 90 | 144 | 1.9e-10 | 40.4 | 2.4e-14 | 3.6e-10 | 39.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_403.1_10739.t1 | gi|308464934|ref|XP_003094730.1| | hypothetical protein CRE_29046 [Caenorhabditis remanei] | 2.0e-34 |
| pfu_aug2.0_403.1_10739.t1 | gi|747107859|ref|XP_011102243.1| | PREDICTED: uncharacterized protein LOC105180264 [Sesamum indicum] | 5.0e-33 |
| pfu_aug2.0_403.1_10739.t1 | gi|729354218|ref|XP_010544480.1| | PREDICTED: uncharacterized protein LOC104817101, partial [Tarenaya hassleriana] | 8.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_403.1_10739.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_403.1_10739.t1 atgttaccgtctcaggagaggaagcgtagtagggatggctcgacctttgacatttacgcttttaagaaagaagaaccaat ggaggttgatgaaccaaaaccagtaatgacggattttgaggatctatatgtactcgaggacaaacaccaagaactggtca aacttgttaagaaaaacaaagatataatagctaaatcagattccgatcttggtggaacaaagacagaactcatgaatatt gttctacaaggatgtgagggattcgaaatggcgtatttagacgacattttgattttctctcaagacgacccaaaacaaca tataaaacacattcaagaggtatttaaccgactgagacaatataacctcaagctgaaactaaagaaatgcgctttcttta aggaggagacagaatacttagggttcgtaatcaacaaatacggcattgctccagatccaaagaaatttgaagcggtcaaa aacttacaagctctgaagaacgatagggaaattcgaggattcatcggaatgtgcagttactacttaagatttgttccaaa tttctcgaagatagcagaacctttgatcaatttaacaaagaaatatgcaagatttaaatgtactcaggaatgccagatcg ctttcgattatcttaagaaaagtctcactgtagaaccactccttgcatacccagataccaacaaaacatatacttatata cggacgcaaagaatggctattaagtattgcaggatacaactacaaggtgaagataatcactgtgcggatcctctgtcccg tataccgcatccggagacaaacgaaaagtgcaagaaatccgaggaagaacctgatattgacgatataacatttgagatag aagtaataaattcaaacgagtttaatccgagagactttgcaaactgtgacgttgaagatcgacaagaaatcacaaaagct ttcagatttacctga |
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Protein
| Protein ID | pfu_aug2.0_403.1_10739.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_403.1_10739.t1 MLPSQERKRSRDGSTFDIYAFKKEEPMEVDEPKPVMTDFEDLYVLEDKHQELVKLVKKNKDIIAKSDSDLGGTKTELMNI VLQGCEGFEMAYLDDILIFSQDDPKQHIKHIQEVFNRLRQYNLKLKLKKCAFFKEETEYLGFVINKYGIAPDPKKFEAVK NLQALKNDREIRGFIGMCSYYLRFVPNFSKIAEPLINLTKKYARFKCTQECQIAFDYLKKSLTVEPLLAYPDTNKTYTYI RTQRMAIKYCRIQLQGEDNHCADPLSRIPHPETNEKCKKSEEEPDIDDITFEIEVINSNEFNPRDFANCDVEDRQEITKA FRFT |
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