Gene
| Gene Model ID | pfu_aug2.0_403.1_10740 |
|---|---|
| Locus | scaffold403.1 : 327615 ... 335005 : + |
| To GenomeBrowser | scaffold403.1:327615..335005 |
| Genes list of scaffold | scaffold403.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cystathionine gamma-synthase | GO:0003824 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_403.1_10740.t1 | 1 | 1 | Cys_Met_Meta_PP | 1 | 72 | 1.5e-20 | 72.8 | 1.1e-24 | 1.6e-20 | 72.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_403.1_10740.t1 | gi|676468825|ref|XP_009058333.1| | hypothetical protein LOTGIDRAFT_217598 [Lottia gigantea] | 2.0e-23 |
| pfu_aug2.0_403.1_10740.t1 | gi|524888992|ref|XP_005101059.1| | PREDICTED: cystathionine gamma-lyase-like [Aplysia californica] | 1.0e-20 |
| pfu_aug2.0_403.1_10740.t1 | gi|585661792|ref|XP_006816628.1| | PREDICTED: cystathionine gamma-lyase-like, partial [Saccoglossus kowalevskii] | 2.0e-18 |
| pfu_aug2.0_403.1_10740.t1 | gi|268563372|ref|XP_002638821.1| | Hypothetical protein CBG22025 [Caenorhabditis briggsae] | 2.0e-18 |
| pfu_aug2.0_403.1_10740.t1 | gi|71980708|ref|NP_492486.2| | CBL-1, isoform a [Caenorhabditis elegans] | 7.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_403.1_10740.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_403.1_10740.t1 atgggtggacatagtgatctgacggcaggaagcctcacgtttaggactttggatttatggcagacaatgattaggtacca aacaacgttcggatctagcttgtctgctcacgatgccagtttacttctaagaggtttaaaaacactgcctctacgcatgg caagacacagctctaatgcacagaaagtcgccgagttcttggaaaagcacccgaag |
|
Protein
| Protein ID | pfu_aug2.0_403.1_10740.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_403.1_10740.t1 MGGHSDLTAGSLTFRTLDLWQTMIRYQTTFGSSLSAHDASLLLRGLKTLPLRMARHSSNAQKVAEFLEKHPK |
|