Gene
| Gene Model ID | pfu_aug2.0_4036.1_22492 |
|---|---|
| Locus | scaffold4036.1 : 16486 ... 19405 : - |
| To GenomeBrowser | scaffold4036.1:16486..19405 |
| Genes list of scaffold | scaffold4036.1 |
| Synonym | pfu_aug1.0_1360.1_44000 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4036.1_22492.t1 | 1 | 1 | TMEM187 | 11 | 256 | 0.0 | 216.3 | 0.0 | 0.0 | 216.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4036.1_22492.t1 | gi|676453816|ref|XP_009053477.1| | hypothetical protein LOTGIDRAFT_56839, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4036.1_22492.t1 | gi|524875388|ref|XP_005094422.1| | PREDICTED: transmembrane protein 187-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_4036.1_22492.t1 | gi|291236929|ref|XP_002738391.1| | PREDICTED: transmembrane protein 187-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_4036.1_22492.t1 | gi|260810608|ref|XP_002600051.1| | hypothetical protein BRAFLDRAFT_79694 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_4036.1_22492.t1 | gi|556995406|ref|XP_006001507.1| | PREDICTED: transmembrane protein 187 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4036.1_22492.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4036.1_22492.t1 atgaccttggcaatgcttctacctttcaccattgttgccatggtaactctcataatgtctgtggtaacatatattggaac atttgatcatgtgaccacagagctcggaagcgatcactatgcagagaagtgtccagaatttttgtcgaaatttgtcccag aatccttcacgatgcctatgaatactttagtcaatattgggtacatcatggtcggagcatactacagtgctgtagctagt gtgcgatcaaagcagcaagacttcagtgcgcaagactgctttatgttctacttattcaactttggtgcagcattctatgg ggtcattcaaacactccgaattttgacccagatgcacaaatttgctgtcatggaccagtggtacactctgccactcttta tatttgtattcatctggagtaaaagtctaactgcaaatccacaaccaacacaaagtgcaatcatcatggcgctttctctc acaagctattcccttgctctattgactgaaattggatttgagattgctcttgctttccatatatttgtagctgttatagg aggtgtgacagcttatagaaaattttccgctacaagtgcaccaagggcattctttggagcgttacttagttgtgtaggat ttgtatttttgaaacttcttgacctagagctaccaaagtatcactcattgttcacttttatatcagggcatttcatatcg aaaattgctgatattttacagatatattatgtaaatgtttactttgaagctctcactttgcataagaacaaacttaaagc acaaaaatctgactaa |
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Protein
| Protein ID | pfu_aug2.0_4036.1_22492.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4036.1_22492.t1 MTLAMLLPFTIVAMVTLIMSVVTYIGTFDHVTTELGSDHYAEKCPEFLSKFVPESFTMPMNTLVNIGYIMVGAYYSAVAS VRSKQQDFSAQDCFMFYLFNFGAAFYGVIQTLRILTQMHKFAVMDQWYTLPLFIFVFIWSKSLTANPQPTQSAIIMALSL TSYSLALLTEIGFEIALAFHIFVAVIGGVTAYRKFSATSAPRAFFGALLSCVGFVFLKLLDLELPKYHSLFTFISGHFIS KIADILQIYYVNVYFEALTLHKNKLKAQKSD |
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