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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_405.1_17392
Locus scaffold405.1 : 1554 ... 42385 : -
To GenomeBrowser scaffold405.1:1554..42385
Genes list of scaffold scaffold405.1
Synonym pfu_aug1.0_6328.1_02211

Manual annotation
Annotation by Blast2GO
Annotation GO
talin-1-like isoform x1 GO:0005515 GO:0044464

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_405.1_17392.t1 1 1 FERM_N 73 173 5.4e-11 42.3 7.6e-14 1.9e-10 40.6
pfu_aug2.0_405.1_17392.t1 16 1 I_LWEQ 121 138 1.3e-35 122.6 4.5 11000.0 -3.9
pfu_aug2.0_405.1_17392.t1 5 1 FERM_M 179 286 5.5e-24 84.7 2.2e-27 5.5e-24 84.7
pfu_aug2.0_405.1_17392.t1 13 1 Talin_middle 422 563 1.6e-31 109.1 6.5e-35 1.6e-31 109.1
pfu_aug2.0_405.1_17392.t1 16 2 I_LWEQ 466 490 1.3e-35 122.6 0.86 2100.0 -1.5
pfu_aug2.0_405.1_17392.t1 11 1 VBS 470 549 1.0e-27 96.8 0.57 1400.0 -0.6
pfu_aug2.0_405.1_17392.t1 16 3 I_LWEQ 523 573 1.3e-35 122.6 0.34 840.0 -0.2
pfu_aug2.0_405.1_17392.t1 16 4 I_LWEQ 591 646 1.3e-35 122.6 0.042 100.0 2.7
pfu_aug2.0_405.1_17392.t1 11 2 VBS 591 645 1.0e-27 96.8 0.68 1700.0 -0.8
pfu_aug2.0_405.1_17392.t1 16 5 I_LWEQ 735 782 1.3e-35 122.6 4.1 10000.0 -3.7
pfu_aug2.0_405.1_17392.t1 13 2 Talin_middle 763 783 1.6e-31 109.1 3.7 9100.0 -3.9
pfu_aug2.0_405.1_17392.t1 13 3 Talin_middle 823 878 1.6e-31 109.1 0.00025 0.63 9.7
pfu_aug2.0_405.1_17392.t1 5 2 FERM_M 837 863 5.5e-24 84.7 2.0 4900.0 -2.4
pfu_aug2.0_405.1_17392.t1 11 3 VBS 842 871 1.0e-27 96.8 0.5 1200.0 -0.4
pfu_aug2.0_405.1_17392.t1 16 6 I_LWEQ 848 875 1.3e-35 122.6 0.00095 2.3 8.1
pfu_aug2.0_405.1_17392.t1 13 4 Talin_middle 929 956 1.6e-31 109.1 0.13 330.0 0.8
pfu_aug2.0_405.1_17392.t1 16 7 I_LWEQ 978 1029 1.3e-35 122.6 0.054 130.0 2.4
pfu_aug2.0_405.1_17392.t1 11 4 VBS 982 1044 1.0e-27 96.8 0.71 1800.0 -0.9
pfu_aug2.0_405.1_17392.t1 13 5 Talin_middle 1016 1103 1.6e-31 109.1 0.21 530.0 0.1
pfu_aug2.0_405.1_17392.t1 16 8 I_LWEQ 1122 1192 1.3e-35 122.6 0.22 530.0 0.4
pfu_aug2.0_405.1_17392.t1 11 5 VBS 1122 1163 1.0e-27 96.8 0.12 300.0 1.6
pfu_aug2.0_405.1_17392.t1 13 6 Talin_middle 1128 1182 1.6e-31 109.1 0.0031 7.8 6.1
pfu_aug2.0_405.1_17392.t1 11 6 VBS 1234 1327 1.0e-27 96.8 0.89 2200.0 -1.2
pfu_aug2.0_405.1_17392.t1 16 9 I_LWEQ 1298 1360 1.3e-35 122.6 0.39 960.0 -0.4
pfu_aug2.0_405.1_17392.t1 13 7 Talin_middle 1298 1330 1.6e-31 109.1 0.75 1800.0 -1.6
pfu_aug2.0_405.1_17392.t1 5 3 FERM_M 1366 1419 5.5e-24 84.7 0.28 700.0 0.3
pfu_aug2.0_405.1_17392.t1 16 10 I_LWEQ 1434 1453 1.3e-35 122.6 4.2 10000.0 -3.8
pfu_aug2.0_405.1_17392.t1 13 8 Talin_middle 1504 1597 1.6e-31 109.1 0.087 220.0 1.4
pfu_aug2.0_405.1_17392.t1 11 7 VBS 1510 1568 1.0e-27 96.8 3.0e-05 0.073 13.3
pfu_aug2.0_405.1_17392.t1 16 11 I_LWEQ 1572 1633 1.3e-35 122.6 0.085 210.0 1.7
pfu_aug2.0_405.1_17392.t1 13 9 Talin_middle 1602 1629 1.6e-31 109.1 0.16 390.0 0.6
pfu_aug2.0_405.1_17392.t1 11 8 VBS 1660 1783 1.0e-27 96.8 6.4e-31 1.6e-27 96.2
pfu_aug2.0_405.1_17392.t1 13 10 Talin_middle 1706 1797 1.6e-31 109.1 0.075 190.0 1.6
pfu_aug2.0_405.1_17392.t1 16 12 I_LWEQ 1714 1814 1.3e-35 122.6 0.063 160.0 2.1
pfu_aug2.0_405.1_17392.t1 5 4 FERM_M 1755 1779 5.5e-24 84.7 1.3 3200.0 -1.8
pfu_aug2.0_405.1_17392.t1 16 13 I_LWEQ 1828 1944 1.3e-35 122.6 0.13 310.0 1.2
pfu_aug2.0_405.1_17392.t1 11 9 VBS 1836 1920 1.0e-27 96.8 1.9 4700.0 -2.3
pfu_aug2.0_405.1_17392.t1 13 11 Talin_middle 1850 1916 1.6e-31 109.1 3.3e-05 0.081 12.6
pfu_aug2.0_405.1_17392.t1 16 14 I_LWEQ 1994 2070 1.3e-35 122.6 0.078 190.0 1.8
pfu_aug2.0_405.1_17392.t1 11 10 VBS 2017 2094 1.0e-27 96.8 0.07 170.0 2.4
pfu_aug2.0_405.1_17392.t1 13 12 Talin_middle 2049 2094 1.6e-31 109.1 0.069 170.0 1.8
pfu_aug2.0_405.1_17392.t1 16 15 I_LWEQ 2074 2172 1.3e-35 122.6 0.00041 1.0 9.3
pfu_aug2.0_405.1_17392.t1 5 5 FERM_M 2113 2162 5.5e-24 84.7 0.77 1900.0 -1.1
pfu_aug2.0_405.1_17392.t1 13 13 Talin_middle 2148 2174 1.6e-31 109.1 0.072 180.0 1.7
pfu_aug2.0_405.1_17392.t1 16 16 I_LWEQ 2181 2315 1.3e-35 122.6 5.2e-39 1.3e-35 122.6
pfu_aug2.0_405.1_17392.t1 11 11 VBS 2242 2282 1.0e-27 96.8 1.7 4100.0 -2.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_405.1_17392.t1 gi|548522742|ref|XP_005751357.1| PREDICTED: talin-1-like isoform X1 [Pundamilia nyererei] 0.0
pfu_aug2.0_405.1_17392.t1 gi|499027973|ref|XP_004564717.1| PREDICTED: talin-1 [Maylandia zebra] 0.0
pfu_aug2.0_405.1_17392.t1 gi|548522752|ref|XP_005751359.1| PREDICTED: talin-1-like isoform X3 [Pundamilia nyererei] 0.0

Transcript
Transcript IDpfu_aug2.0_405.1_17392.t1
Definition-
>pfu_aug2.0_405.1_17392.t1
atggagtctagatttgaggattgtcaaacagaggatgaagtacatgaaaaacttctgaaaatcctcggtaacgagtttct
gaatctgggagcagagaacagggaagctgcatatgaagcgtttaaaaagaactgtgagcagtatatcaacaaagaggaag
gagcaaagaaatatgacaaactggaggaggtcgtcaaaggtatccatggtgacgaccttgatattagtaccctcatacag
tcagcagaggacagaatagtgtatattcaaggaatcaagaaccatgaggagtattcacttgttgttgaggtaccagacga
aatgaaaggtacaatcagtagagggacattgagcaggatgaaggaaaaatctatcgctaaggatgaagaaaaaatggaaa
agttacgcaagaaactacacactgatgaagaattggactggcttgaccactctaagtcactggctgagcagggagtgacc
agtaatatgacacttatactaaggaggaaattcttctactctgatagaaacgtggacaagagtgaccctgtacagctcaa
tctactattctctcaggctcgggattcaattataaacggtgtacatcccgtcactcaggacgaggccatccagtttgccg
gtctacagtgtcaggtccagtatggtgaccacaatgaggaaaaacataaatccctagagttaaaggattttctgccagag
gattatgtgaagaagtggcagattgagagtaagatatttgatgagcacaagaagtgtagaggactaacggagcttgatgc
taagtctaagtacaccaagaaatgtcggaggttaaagacctatggtatcactgccttcctggtcaaggagaagatgccag
gaaagaataagctagtgcctattttatttggaatcactaaagagagcgtagtcagaatggacaaggaaaccaaagagata
ctgaaaacctggccactgaccaaagttagaaagtgggctgcctctcctaacagctttatattggactttggtgattatca
agaggagtattactcggtacaaacacaagaaggagaggagatagccaagctcatatctggttatatagatatgatcctaa
aacggagacaagccagagattatgaaggtctggagggttttggaggagcaatgtatgaaaccagtgtgggacgtggaaag
gcgactatgatgatgcacggcaattttcagggtcgtaagcgtcatcacatgatgacacagccgcaacaagccttgttcca
agatggcgccactattgtacaaaaagcacagacattcatggacaaaggatatgctctgccacaacttggaaatgactcgg
cctctgacagatggagagatgacacctcggacatgtctaaagaaagagtcacagcagaattgtcttccctgagtgctgct
accgctaaattggttgccatggcaatggacccaaatgtagaaaccagcgctgttggtgcagcgatagcccaaatctcatc
caacctccatgactttgctggtgacattgctaagctagcagccctggctgatgatgatcagagcagaaacaatctgttag
gcgcggcacgacagctgatcggggctttctctgacttcctcagtgctgctagaacaaaggaggggagagagaacatgcag
gaggaggcagagaagttaaagaagattataggtgatgtgatggacagtataggtaaaccccatggaatgacggacaggat
gtaccaacaacgactactggccctggccaaggatgtgaaaataccaatgacaggtcttgtgagagaggccaaggatatgg
tggaagatgatgaccctgaggacgtgaaggaaactatagatatggccactacagactgtgacatggctgtgtcacaactc
atagccactacaaagattgtgatgccaatgatagagaccccagcgtgccaggaccagttgaagatgggtatgtctggtgt
ggcctcatctgtagatgggctgctagaggccctcaggcaatcattcggtgatgacagtctgtccaccgggctcagttctg
ctgtggctggcgtcactaatgcactaaaagacttactcaagtttatggagagaggacccgactcagataggattgtgatg
ccaatgatagagaccccagcgtgccaggaccagttgaagatgggtatgtctggcgtggcctcatctgtagatgggctgtt
agaggccctcaggcaatcattcggtgatgacagtctgtccaccgggctcagttctgctgtggctggcgtcactaatgcac
taaaggacttacttaagtttatggagagaggacccgactcagacagggatacaaatgcacgagagagggccgtagataag
atactaactcattcagataaactatttgataacgcaggcgatggaaggaaaatggctaaacatgccgagtcaatggcaga
ggtatcatcagtgttaggtaagctgatacagggtatgggggaagagtccgatgatccagatctcaggaaacgtctccttg
ctgctgcacaacaagtctccgatgctacgtcacaattattacaggctgcaaagggctgtgctggcaacccagatgacccc
agtctacaggatgctctcaagtattctgccgaaaacttactggccgctttaaaaggtgctgatgctacggcagttagaaa
tcaactcatcaggaatctggaggctgccatacagagaacgttatatgcctctacacagctacagaccagtgcaagtacag
ctaacagatctaacaccaatgatacttctaaaaaggaactcaagttgcactctgatactttaaccgatcatttacctggc
ctggtacataacttaaaattatcagagaaaaatccaggtgatgtcacgtcacaattcagccttgtacatgccagtaaaga
attcattccatcagcagatagcttagtgtctgcttgtaagacggcctcacccacagttgagaacataccagcctctatta
accttgaccattccgtgagggaaatggctgctgcccttgcccaactgaaaactgccacagcaagagcagaactagcctgt
acagtacaggatgtaggtggcgctcttaacatgctaggcacactgggaagggagcttgaggaatttcaaggagaggtatc
aaaaggcaatctcatacctctccctggagatacggctgagggttgtgcagtaaaactcagtggagcttccaaggtcgtga
cttctaacgtaggaaaattgatgagagcaaactcacagggtgaatcaggtcagtttggagtgatttcccatgacactgtg
aatgctttacgagccctgatagaggccacacggggtgtagcggcgactagccccgacaaaaatgtacagaacagtatact
agacggggcgcggaatgtgatagatacactgagaaaactccttgaagctgccaacgacccaaacggagcagatcaacagg
atcttaatcagatgggccaggcagtaacatcagctctcagtaaatgtgtcaatagtctacctggacaggttgttgtggac
aacatcatcaaccagatcatagaatcaggaaaatccatggcaacagtacagctaccagaatcagacaagagccttgagga
gttacaacaggagatggatcaggcagcttcagacttcagtaaggccggagctgaggtgatcggggggtcacgcggtctac
cacagctagcggaggctgccaggagatacatgagcacctaccatacactggttaggacaggacttgccacagcaggaaag
tctcatccagtggctgagaagaaaatacgagataatttagagaaaacgtccactgtggcaagtcagctacttatggctgc
caagaaatttgccgctgatcctaatcaacataatgctaaaaatctactacaacaggctgcaagcataggaatgtactttt
actgttcatgcttcattcagttgatgaagagtctactggagaatactagtgaggccatgtcagacatgaattactcccaa
tgtatcgactcaatctcagagaaaacaaagcaccttggattggctatgactggtatatcagacactgtgaagaagaagga
cagtgccaagttctgtgagtctgtacagcacgtacagggagccgtgggcggactgacagaggccgcagctcaggcagcgt
acttggtagccatttcagatcctgagtcagttgaaggaaggccgggcttactggaccccacacagttttctcaggctaac
caagcagtacatacagtctgcaaaaaactcatcaacctaacactgtcacaacaacaggtaggtccagtaagagctgctgc
cccaggacagagggagtgtgaagaagctatcagtaaaattactaagtgtgagagggacctggaccatgcctcgctcgagg
ccatgacacagagtttaccccccaggaaggacaacactcttaatggattccaagaaataatgacaagagagatcaaggcc
atacaatcaatggtggaggaggttagagaggcagctaaatctgatcctgtagcactgggaaataaggcaatgaccctgtc
cagtcactttgagcctctatctgacagtgctataggttgtgcttcactgaccgccagcgttatggatgaagcaccactcc
ttgatttgaccaagactgtggccgagtccacgagggaactactgaccacatgtaaaaatagtgttggaaaaccagaggaa
gggtcgggtgaggctgtagacaatgcagccaggagtctgttggaagtgatcagggacttactgaaatcgctagaagagtc
agcatcacaggccggaatgatagaacggctggaagataaacttaatgcatctatggccaagattcaccagcggcagtcaa
tgggagaggatatgacgtactctgcctgtcagactaagatgattgccctaggtaagaaaatcacacgcactgctcaggag
atgaacagtaaagccggtactagtgtagcagagctcggtccgtactctgatcagctgacggacgattatgataaactggc
ttcctatggagcttcagctacgacggtcgttacaagcggagatcttgctgccaagatccagacagctacagaggaggtgg
gtaagagttgtgtaggacttgtacactgtgccggggacgtacagagagactctcaggattctcagctgcgtaaagcatta
aacgacagtgctagagaggttgcccagaaggtagcggccatgctggcagctctacaggaggggtcaaagggcacggaggc
atgtattaacgctatgagtaacattagtagtgttgtggcagacttggagacgtctataatgtttgctcaggcgggtactc
tcacgtcagagggaggcatgtttgctgatcatagggaggatatagcaacagcagtgaaatccatggtgtgtgatacagag
ttcctggcaggggtcgtatccaaacaagacaaactcgttggagctgctcaacagactgtcgtctctgttacaaccttggc
tgatatggtcaaattaggggccatttctctaggctcagaaaattccagctcccaggttcttcttttgggagcggtgaagg
atgtagcttcagcccttacagatctcctgaacacagctaaaacgtcctcagagaaacctgatgcagatatgactgctgtg
gaacagaaaaaagaggttgctgtacataaagtgtcagctttacagaaggcagtggaaacgattgaagatgaatcaacaag
aggcacaaaggcactggaggccactatagaggcaatacaacaagaaatcaagtcatacgtggatggaactctccctgaca
aaccttcttctgctgaagatctcattaggcttaccaaaccaatcaccttggcaaccactaaagctgttaccgccggcaac
tctggtagacaggaagatgctatcatttgtgccaacgcaggtcgtaaagctgtcatagatctactgggtgcttgtagggg
agcagcagttacagcagaaacagaggaggtgaaggacttggcagtacgtaacggtcaagtgtgtgccgagacgttcagag
atctcctacaacatgtcagacagatgttaaagagtccctccaaagacagtaaaagtctactgatagaactgtccaggaaa
gtggctagctccgttactgaacttgttaagtctgcacaggctattaaaggcagtgattgggaagaccctgatgatcccac
agttatagcagaaaatgaattactcggagctgccaagtctatagaggctgcggcagaaaaactggctcaactcaaaccca
ggaaaaaggccaaggaggcagacaagtctctgaactttgaggagcacattttagaggccaccaaatccatcgcggcagcc
acggcagctctggtgaaatcagcatccctggctcagaaagaattggtgctacagggcaaggccaggatggttgcgcgagc
cacagagaatctttgtgatgcggcacatgacatggttcaaggtaaagcctcggaggaacgcctcatcgcagcggcacatg
aagtggcctcatccaccgtcgccttggtgatggcttgtactgtcaaggccgatccaaactctaaatccatgcaacgatta
caggaggcaggtaacaaagtgaaagtagcgactgacgcgttagtgaaagaggccagagaggcaaagacatggacggagga
ggaagaaaaagtagtggtcaataagcgacaggtgggcggcatagctcaggaaatgtcagcaatggaggaaatgcttaaaa
aagaaaaagaactcgagcaagccagacagcggttggctaaaattagaaaggagaggtaccagaacaagtaa

Protein
Protein IDpfu_aug2.0_405.1_17392.t1
Definition-
>pfu_aug2.0_405.1_17392.t1
MESRFEDCQTEDEVHEKLLKILGNEFLNLGAENREAAYEAFKKNCEQYINKEEGAKKYDKLEEVVKGIHGDDLDISTLIQ
SAEDRIVYIQGIKNHEEYSLVVEVPDEMKGTISRGTLSRMKEKSIAKDEEKMEKLRKKLHTDEELDWLDHSKSLAEQGVT
SNMTLILRRKFFYSDRNVDKSDPVQLNLLFSQARDSIINGVHPVTQDEAIQFAGLQCQVQYGDHNEEKHKSLELKDFLPE
DYVKKWQIESKIFDEHKKCRGLTELDAKSKYTKKCRRLKTYGITAFLVKEKMPGKNKLVPILFGITKESVVRMDKETKEI
LKTWPLTKVRKWAASPNSFILDFGDYQEEYYSVQTQEGEEIAKLISGYIDMILKRRQARDYEGLEGFGGAMYETSVGRGK
ATMMMHGNFQGRKRHHMMTQPQQALFQDGATIVQKAQTFMDKGYALPQLGNDSASDRWRDDTSDMSKERVTAELSSLSAA
TAKLVAMAMDPNVETSAVGAAIAQISSNLHDFAGDIAKLAALADDDQSRNNLLGAARQLIGAFSDFLSAARTKEGRENMQ
EEAEKLKKIIGDVMDSIGKPHGMTDRMYQQRLLALAKDVKIPMTGLVREAKDMVEDDDPEDVKETIDMATTDCDMAVSQL
IATTKIVMPMIETPACQDQLKMGMSGVASSVDGLLEALRQSFGDDSLSTGLSSAVAGVTNALKDLLKFMERGPDSDRIVM
PMIETPACQDQLKMGMSGVASSVDGLLEALRQSFGDDSLSTGLSSAVAGVTNALKDLLKFMERGPDSDRDTNARERAVDK
ILTHSDKLFDNAGDGRKMAKHAESMAEVSSVLGKLIQGMGEESDDPDLRKRLLAAAQQVSDATSQLLQAAKGCAGNPDDP
SLQDALKYSAENLLAALKGADATAVRNQLIRNLEAAIQRTLYASTQLQTSASTANRSNTNDTSKKELKLHSDTLTDHLPG
LVHNLKLSEKNPGDVTSQFSLVHASKEFIPSADSLVSACKTASPTVENIPASINLDHSVREMAAALAQLKTATARAELAC
TVQDVGGALNMLGTLGRELEEFQGEVSKGNLIPLPGDTAEGCAVKLSGASKVVTSNVGKLMRANSQGESGQFGVISHDTV
NALRALIEATRGVAATSPDKNVQNSILDGARNVIDTLRKLLEAANDPNGADQQDLNQMGQAVTSALSKCVNSLPGQVVVD
NIINQIIESGKSMATVQLPESDKSLEELQQEMDQAASDFSKAGAEVIGGSRGLPQLAEAARRYMSTYHTLVRTGLATAGK
SHPVAEKKIRDNLEKTSTVASQLLMAAKKFAADPNQHNAKNLLQQAASIGMYFYCSCFIQLMKSLLENTSEAMSDMNYSQ
CIDSISEKTKHLGLAMTGISDTVKKKDSAKFCESVQHVQGAVGGLTEAAAQAAYLVAISDPESVEGRPGLLDPTQFSQAN
QAVHTVCKKLINLTLSQQQVGPVRAAAPGQRECEEAISKITKCERDLDHASLEAMTQSLPPRKDNTLNGFQEIMTREIKA
IQSMVEEVREAAKSDPVALGNKAMTLSSHFEPLSDSAIGCASLTASVMDEAPLLDLTKTVAESTRELLTTCKNSVGKPEE
GSGEAVDNAARSLLEVIRDLLKSLEESASQAGMIERLEDKLNASMAKIHQRQSMGEDMTYSACQTKMIALGKKITRTAQE
MNSKAGTSVAELGPYSDQLTDDYDKLASYGASATTVVTSGDLAAKIQTATEEVGKSCVGLVHCAGDVQRDSQDSQLRKAL
NDSAREVAQKVAAMLAALQEGSKGTEACINAMSNISSVVADLETSIMFAQAGTLTSEGGMFADHREDIATAVKSMVCDTE
FLAGVVSKQDKLVGAAQQTVVSVTTLADMVKLGAISLGSENSSSQVLLLGAVKDVASALTDLLNTAKTSSEKPDADMTAV
EQKKEVAVHKVSALQKAVETIEDESTRGTKALEATIEAIQQEIKSYVDGTLPDKPSSAEDLIRLTKPITLATTKAVTAGN
SGRQEDAIICANAGRKAVIDLLGACRGAAVTAETEEVKDLAVRNGQVCAETFRDLLQHVRQMLKSPSKDSKSLLIELSRK
VASSVTELVKSAQAIKGSDWEDPDDPTVIAENELLGAAKSIEAAAEKLAQLKPRKKAKEADKSLNFEEHILEATKSIAAA
TAALVKSASLAQKELVLQGKARMVARATENLCDAAHDMVQGKASEERLIAAAHEVASSTVALVMACTVKADPNSKSMQRL
QEAGNKVKVATDALVKEAREAKTWTEEEEKVVVNKRQVGGIAQEMSAMEEMLKKEKELEQARQRLAKIRKERYQNK

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Okinawa Institute of Science and Technology
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