Gene
| Gene Model ID | pfu_aug2.0_405.1_17394 |
|---|---|
| Locus | scaffold405.1 : 69597 ... 81955 : - |
| To GenomeBrowser | scaffold405.1:69597..81955 |
| Genes list of scaffold | scaffold405.1 |
| Synonym | pfu_aug1.0_7431.1_38544 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium bicarbonate transporter-like protein 11-like | GO:0005215 GO:0006820 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_405.1_17394.t2 | 2 | 1 | HCO3_cotransp | 166 | 446 | 0.0 | 317.1 | 0.0 | 1.4013e-45 | 155.5 |
| pfu_aug2.0_405.1_17394.t2 | 2 | 2 | HCO3_cotransp | 468 | 708 | 0.0 | 317.1 | 0.0 | 0.0 | 166.9 |
Transcript
| Transcript ID | pfu_aug2.0_405.1_17394.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_405.1_17394.t1 atgttagacggttccgggggtaaacacagctttgatcaggctaggtcagccctcttcacacatgactgtgttcaccagtt aagtagaacgttacagtgtacgagcgtgtcggagggaggagggtttgactacgaccagaactggatatgtgctatggcga gcgtgccgtctatccagacacgtcacgttggtataggtcggctcagacatccagccaatctgggcacgagcagccaagaa gtacagtttgttgttgtagtgctcacacctacaaaagaaaaaggtacaaagaatgagttggagacgggacgatcgttcgc cactattttctctgacgtcaacgtgaggttggacctcttagaagctaacacagaggaggagtttaagaggatacttggtc accatgccaacagcttggctgaggtgcagaaaatggctactgagaaagtcaccatagatgaatcagacgtagactcgtct aagtgtcggtgtggtatatttaggggtatcagagacgacctgaggcggaggctacctgtttatgtatcagattatgtcga tggtattgttggtccaaaaacattacaaaagacgatatctactacgtttttcctgtattttgcgtgtttgatgccatcca ttgcctttggtgtactcaatgaaaacaacacaaagggatggctaaatgtggagaaagtgttatactctcagacaatggga ggtctcttttttgccatatttggaggtacacctcacgtcgtgctcttgaccacagcacctctagctctctacacgaaaat tatttacagtatttgtgaggattttgacattgacttcccggccatgtactgctgtgtgggactgtggaacagcctcttcc tcttcctgtactccatatttgatctcagcatactgatgcagtggtctaccaggtcatcagaggagatatttgctttgttt atctctattgcattttgtgtggatgcattcaaggatacggccagaaattttggggagcattataatcttgctgcctgcag tcaatcacctcaacaatactcacaagttctcaatgccagcaaccatatgtcaaacggcacaacaactgtatcaagtgtga taaatgttaccatgacaacggccaaacaaatcacagaccaagctgtgacagagtgtgaacgagacaacagccttctctat ctgttacttttatttgggacattatggctcggagtcactctgtacaactttacaaaaacgccgtacctgaatgcagggaa gcgtgagatattagcggattacgccctccccgtggccgttatcgtcatgagcttttttggatcatacgtgttcagagacg tcaacttgggtaaaagtttcaccgccaacaagctgagcttggacatattccagctgatgccgttatataagttgtctatt ggagctatatttggtgccatgggacttggattctgcttgtctctcctcttctttatggatcagaatatatcagcagctct tgtcaactcaccatctaacaaattaaagaagggaacagcttaccattgggatctgttggtgtgtgggtttattaatgctg ggctgagtctcctgtctttcccctgggtccatgctgccttaccacactctcccctacatgtgagagcactggctgatgtc gaagaaagagttgaccaaggtcatatatatcaaattgtagtaaaagtgagggaaacccgtttgacatgtatcctgtcaca ccttttgattggactctccctgcttgccttagaatatttagcttacatccctacacctgtactttatggactcttcctgt acgtgggcgtgacatcactttatggaaatcaaatgtttgagcgggtcatgctcctctttacagaacagagtgcatatcca cctaaccattacatacgacgtgtaccacagagaaagatgcacttgtttaccatgctgcagttattacagcttgtggtgct atgtggatttggcttcgctccatacgcctaccttaaaatgttcttccccgttctcatcttcttactcatacctctcagac acaaggttatccctcatgccgttgaccagaagttcttgaaggccatggacagtcactga |
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| Transcript ID | pfu_aug2.0_405.1_17394.t2 |
| Definition | - |
>pfu_aug2.0_405.1_17394.t2 atgttagacggttccgggggtaaacacagctttgatcaggctaggtcagccctcttcacacatgactgtgttcaccagtt aagtagaacgttacagtgtacgagcgtgtcggagggaggagggtttgactacgaccagaactggatatgtgctatggcga gcgtgccgtctatccagacacgtcacgttggtataggtcggctcagacatccagccaatctgggcacgagcagccaagaa gtacagtttgttgttgtagtgctcacacctacaaaagaaaaaggtacaaagaatgagttggagacgggacgatcgttcgc cactattttctctgacgtcaacgtgaggttggacctcttagaagctaacacagaggaggagtttaagaggatacttggtc accatgccaacagcttggctgaggtgcagaaaatggctactgagaaagtcaccatagatgaatcagacgtagactcgtct aagtgtcggtgtggtatatttaggggtatcagagacgacctgaggcggaggctacctgtttatgtatcagattatgtcga tggtattgttggtccaaaaacattacaaaagacgatatctactacgtttttcctgtattttgcgtgtttgatgccatcca ttgcctttggtgtactcaatgaaaacaacacaaagggatggctaaatgtggagaaagtgttatactctcagacaatggga ggtctcttttttgccatatttggaggtacacctcacgtcgtgctcttgaccacagcacctctagctctctacacgaaaat tatttacagtatttgtgaggattttgacattgacttcccggccatgtactgctgtgtgggactgtggaacagcctcttcc tcttcctgtactccatatttgatctcagcatactgatgcagtggtctaccaggtcatcagaggagatatttgctttgttt atctctattgcattttgtgtggatgcattcaaggatacggccagaaattttggggagcattataatcttgctgcctgcag tcaatcacctcaacaatactcacaagttctcaatgccagcaaccatatgtcaaacggcacaacaactgtatcaagtgtga taaatgttaccatgacaacggccaaacaaatcacagaccaagctgtgacagagtgtgaacgagacaacagccttctctat ctgttacttttatttgggacattatggctcggagtcactctgtacaactttacaaaaacgccgtacctgaatgcagggaa gcgtgagatattagcggattacgccctccccgtggccgttatcgtcatgagcttttttggatcatacgtgttcagagacg tcaactgatataccataatgatcaaactatgtgtacagttttcaaagccgtacctgaatgcagggaagcgtgagatatta gcggattacgccctccccgtggccgttatcgtcatgagcttttttggatcatacgtgttcagagacgtcaacttgggtaa aagtttcaccgccaacaagctgagcttggacatattccagctgatgccgttatataagttgtctattggagctatatttg gtgccatgggacttggattctgcttgtctctcctcttctttatggatcagaatatatcagcagctcttgtcaactcacca tctaacaaattaaagaagggaacagcttaccattgggatctgttggtgtgtgggtttattaatgctgggctgagtctcct gtctttcccctgggtccatgctgccttaccacactctcccctacatgtgagagcactggctgatgtcgaagaaagagttg accaaggtcatatatatcaaattgtagtaaaagtgagggaaacccgtttgacatgtatcctgtcacaccttttgattgga ctctccctgcttgccttagaatatttagcttacatccctacacctgtactttatggactcttcctgtacgtgggcgtgac atcactttatggaaatcaaatgtttgagcgggtcatgctcctctttacagaacagagtgcatatccacctaaccattaca tacgacgtgtaccacagagaaagatgcacttgtttaccatgctgcagttattacagcttgtggtgctatgtggatttggc ttcgctccatacgcctaccttaaaatgttcttccccgttctcatcttcttactcatacctctcagacacaaggttatccc tcatgccgttgaccagaagttcttgaaggccatggacagtcactga |
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Protein
| Protein ID | pfu_aug2.0_405.1_17394.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_405.1_17394.t1 MLDGSGGKHSFDQARSALFTHDCVHQLSRTLQCTSVSEGGGFDYDQNWICAMASVPSIQTRHVGIGRLRHPANLGTSSQE VQFVVVVLTPTKEKGTKNELETGRSFATIFSDVNVRLDLLEANTEEEFKRILGHHANSLAEVQKMATEKVTIDESDVDSS KCRCGIFRGIRDDLRRRLPVYVSDYVDGIVGPKTLQKTISTTFFLYFACLMPSIAFGVLNENNTKGWLNVEKVLYSQTMG GLFFAIFGGTPHVVLLTTAPLALYTKIIYSICEDFDIDFPAMYCCVGLWNSLFLFLYSIFDLSILMQWSTRSSEEIFALF ISIAFCVDAFKDTARNFGEHYNLAACSQSPQQYSQVLNASNHMSNGTTTVSSVINVTMTTAKQITDQAVTECERDNSLLY LLLLFGTLWLGVTLYNFTKTPYLNAGKREILADYALPVAVIVMSFFGSYVFRDVNLGKSFTANKLSLDIFQLMPLYKLSI GAIFGAMGLGFCLSLLFFMDQNISAALVNSPSNKLKKGTAYHWDLLVCGFINAGLSLLSFPWVHAALPHSPLHVRALADV EERVDQGHIYQIVVKVRETRLTCILSHLLIGLSLLALEYLAYIPTPVLYGLFLYVGVTSLYGNQMFERVMLLFTEQSAYP PNHYIRRVPQRKMHLFTMLQLLQLVVLCGFGFAPYAYLKMFFPVLIFLLIPLRHKVIPHAVDQKFLKAMDSH |
|
| Protein ID | pfu_aug2.0_405.1_17394.t2 |
| Definition | - |
>pfu_aug2.0_405.1_17394.t2 MLDGSGGKHSFDQARSALFTHDCVHQLSRTLQCTSVSEGGGFDYDQNWICAMASVPSIQTRHVGIGRLRHPANLGTSSQE VQFVVVVLTPTKEKGTKNELETGRSFATIFSDVNVRLDLLEANTEEEFKRILGHHANSLAEVQKMATEKVTIDESDVDSS KCRCGIFRGIRDDLRRRLPVYVSDYVDGIVGPKTLQKTISTTFFLYFACLMPSIAFGVLNENNTKGWLNVEKVLYSQTMG GLFFAIFGGTPHVVLLTTAPLALYTKIIYSICEDFDIDFPAMYCCVGLWNSLFLFLYSIFDLSILMQWSTRSSEEIFALF ISIAFCVDAFKDTARNFGEHYNLAACSQSPQQYSQVLNASNHMSNGTTTVSSVINVTMTTAKQITDQAVTECERDNSLLY LLLLFGTLWLGVTLYNFTKTPYLNAGKREILADYALPVAVIVMSFFGSYVFRDVNXYTIMIKLCVQFSKPYLNAGKREIL ADYALPVAVIVMSFFGSYVFRDVNLGKSFTANKLSLDIFQLMPLYKLSIGAIFGAMGLGFCLSLLFFMDQNISAALVNSP SNKLKKGTAYHWDLLVCGFINAGLSLLSFPWVHAALPHSPLHVRALADVEERVDQGHIYQIVVKVRETRLTCILSHLLIG LSLLALEYLAYIPTPVLYGLFLYVGVTSLYGNQMFERVMLLFTEQSAYPPNHYIRRVPQRKMHLFTMLQLLQLVVLCGFG FAPYAYLKMFFPVLIFLLIPLRHKVIPHAVDQKFLKAMDSH |
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