Gene
| Gene Model ID | pfu_aug2.0_405.1_17396 |
|---|---|
| Locus | scaffold405.1 : 164686 ... 173902 : + |
| To GenomeBrowser | scaffold405.1:164686..173902 |
| Genes list of scaffold | scaffold405.1 |
| Synonym | pfu_aug1.0_3628.1_66752 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_405.1_17396.t1 | 1 | 1 | DUF2370 | 47 | 151 | 6.2e-25 | 87.9 | 1.6e-28 | 7.9e-25 | 87.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_405.1_17396.t1 | gi|524878269|ref|XP_005095823.1| | PREDICTED: NEDD4 family-interacting protein 1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_405.1_17396.t1 | gi|524878267|ref|XP_005095822.1| | PREDICTED: NEDD4 family-interacting protein 1-like isoform X1 [Aplysia californica] | 1.4013e-45 |
| pfu_aug2.0_405.1_17396.t1 | gi|676441123|ref|XP_009049395.1| | hypothetical protein LOTGIDRAFT_230882 [Lottia gigantea] | 9.80909e-45 |
| pfu_aug2.0_405.1_17396.t1 | gi|73853848|ref|NP_001027505.1| | NEDD4 family-interacting protein 1 [Xenopus (Silurana) tropicalis] | 3.0e-31 |
| pfu_aug2.0_405.1_17396.t1 | gi|363739241|ref|XP_003642145.1| | PREDICTED: NEDD4 family-interacting protein 1-like isoform X1 [Gallus gallus] | 5.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_405.1_17396.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_405.1_17396.t1 atgtcaaggtctaatgtacgatacgagattttagcggatcatgaagagcgtgttccggcagagacagtgaatctggttat ggtggtgccacccccagcctaccctggtgcaagtaaccatggcaatgagttacctacccacaagcttcctagctatgatg acgctacaaaactccctacatatgaagaagcggaaatgacaaagcacgcagaggcgatgttagagagtgtagagagacag gaggaggcctatgagaaccatgcttggaaggtgactacactgggtacagatggaatgttcctttgtgcttttgtcatggc tttcttcttcaactggattggttttctgttttctgtgtgtatgttcaacaccatcgctggtagatgtggcgccctctctg gactaggattgtcaatagtcaaatggatcataatagtcaagcataacagttggggaagtggctgggcagatgaggattcc tggatttggnttttgttgccttttagcagaattaattctagctttagaacattgatagggccagtaagttctatgaaaat gctatttttggcatctacatgctga |
|
Protein
| Protein ID | pfu_aug2.0_405.1_17396.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_405.1_17396.t1 MSRSNVRYEILADHEERVPAETVNLVMVVPPPAYPGASNHGNELPTHKLPSYDDATKLPTYEEAEMTKHAEAMLESVERQ EEAYENHAWKVTTLGTDGMFLCAFVMAFFFNWIGFLFSVCMFNTIAGRCGALSGLGLSIVKWIIIVKHNSWGSGWADEDS WIWXLLPFSRINSSFRTLIGPVSSMKMLFLASTC |
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