Gene
| Gene Model ID | pfu_aug2.0_405.1_17398 |
|---|---|
| Locus | scaffold405.1 : 224636 ... 270746 : - |
| To GenomeBrowser | scaffold405.1:224636..270746 |
| Genes list of scaffold | scaffold405.1 |
| Synonym | pfu_aug1.0_7348.1_38515 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| eukaryotic translation initiation factor 5b | GO:0003924 GO:0005525 GO:0008152 GO:0044822 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_405.1_17398.t1 | 4 | 1 | GTP_EFTU_D2 | 76 | 95 | 7.9e-11 | 41.9 | 0.54 | 1300.0 | -0.5 |
| pfu_aug2.0_405.1_17398.t1 | 2 | 1 | IF-2 | 362 | 376 | 4.8e-18 | 65.0 | 2.0 | 4900.0 | -2.6 |
| pfu_aug2.0_405.1_17398.t1 | 4 | 2 | GTP_EFTU_D2 | 511 | 534 | 7.9e-11 | 41.9 | 6.0 | 15000.0 | -4.0 |
| pfu_aug2.0_405.1_17398.t1 | 4 | 3 | GTP_EFTU_D2 | 675 | 749 | 7.9e-11 | 41.9 | 2.6e-10 | 6.5e-07 | 29.3 |
| pfu_aug2.0_405.1_17398.t1 | 2 | 2 | IF-2 | 780 | 874 | 4.8e-18 | 65.0 | 2.3e-21 | 5.6e-18 | 64.8 |
| pfu_aug2.0_405.1_17398.t1 | 1 | 1 | GTP_EFTU_D4 | 896 | 967 | 4.3e-11 | 42.2 | 4.7e-14 | 1.2e-10 | 40.9 |
| pfu_aug2.0_405.1_17398.t1 | 4 | 4 | GTP_EFTU_D2 | 914 | 965 | 7.9e-11 | 41.9 | 2.7e-05 | 0.067 | 13.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_405.1_17398.t1 | gi|291224326|ref|XP_002732156.1| | PREDICTED: eukaryotic translation initiation factor 5B-like, partial [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_405.1_17398.t1 | gi|524891936|ref|XP_005102500.1| | PREDICTED: eukaryotic translation initiation factor 5B-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_405.1_17398.t1 | gi|676492620|ref|XP_009065980.1| | hypothetical protein LOTGIDRAFT_197410 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_405.1_17398.t1 | gi|195337174|ref|XP_002035204.1| | GM14051 [Drosophila sechellia] | 0.0 |
| pfu_aug2.0_405.1_17398.t1 | gi|675888170|ref|XP_009029587.1| | hypothetical protein HELRODRAFT_103835 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_405.1_17398.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_405.1_17398.t1 atgggtaaaccgaagaataaaaacaagagaaaccaaggagacgacgttgaggataacgaggtagatcttgatcctttagc aaatcagacaccagatgatgacacatcatccaaagttgctacaaaatctgcaggaaaaaagaagaaaggaaagaaaaagg atgatgattgggaggacgacgttgctgaggaaattaaagctttgtcattacagtctaaaggagatttgaatgaaagtgaa gaagaggaggaaatagttgttcctgtcaaaaagaaggagaagaagaagaagaacaagaaggttgaatctgacgaggaaga agaagaagaaatgaaacccaaaggtactttccagatgttgatgatagaggatgatgatatggtacagtctgagagtgaca acgaaatggaagaaaaagaagacacacccgttattgaagcccctaaggaaaacactgtaaaaccacaaaagaaaaaggac aagaaaaaggataaaaaggacactaaacaagaggaagatattgatgcattgttagcagaattagacagaccctcagaaaa atcaaaaaagaagaaaaagaagaaaggggaggaagaagaaactacagaggcagcccctgccactggaactgaagaacaac aagaagttgatatagaagctaaaatggctgaggctaaagtagtgtctattgatgacttcgatgaggaagaggatgacaaa aagaagaaaaagagagaaaagaagaagaaggcaaagaaagcagatgctgaacagaaggatggagaagaagaaggagaaaa acaggaaggagagaatgaaggagagggggaggagggttcagtaaaaacagcagctcagaaaaggaaagaaaagaaagaaa gagaaaaactaaaaaagcaacaggagaaaaagaagagtaagagtaaaggagagggggctacagggactgaggatcaagct gaaggagataaggaaggggagggcaaagatgatgctgaagaggatgaaggtgaagagaaggaaggaaagaagaagaaaaa gaaaggagagaaagaagaaaagaaaaagaaatcaaaagcaccagtggcagctatcaaagcccagcttcagaagataaagg aagaagaggagaggttaaagagggaagaggaagaaagaatacgcaaggaagaagaagaagaaagactgagagaagaacaa aaaagattagaggaagaaaggaagttaaagaagaagcagaaagagaaggagaagaagcagagactgaaggaggaaggtaa actcctgacagcaaaagagaaacaagacagaaggagggcattacagttattagaacagatgaaagcacaaggtattgatg taccggataaaggagaatcagcagaaaaagacgaggctccagttaagaaaagacctgtatatacaaataagaagaaaaaa cctcaaaaacaaggtaagtctcgagagaaataccatgaggaatgtgaaaagaatcgttctgtagacaagcttagagcagc tgtagtttgtgtgttaggccatgtggatacaggaaaaacaaaaatcctggacaagttacgtagaacacatgtacaagatg gagaggcaggaggtatcacacaacagataggtgctacaaacgttccagaatctgccattagagagcagactaaaatgtgt aaagagattgatcgtttatatcagtggaagacgagccctcatacggacgtacagaacacaatcaaaaagcagtcacctca cacaaagtccgagtttgacgagcgtgctcaggaggttatagtacagatggctgagcagggaatcaacgctgcgttgtatt atgagaataagaatcctcgggagtatgtgtcattggtgccgacatctgctcactcaggggacggtatgggtaaccttatt gcactcatctgtgaactgacccagaccatgttggctaaacgtgtctcctacagtgaagagctccaagctacggtgatgga ggtgaaggcgttacctggtcttggaaccactattgacgttatcctagtcaacgggcacctgcgggagagtgaccagatcg tggtgccgggtacagagggcccaatagtcacccacatccggggactgttaatgcctcagccaatgaaagagctcagagtc aagagtcagtgggaacaccacaaagaagtgtacgctgctcagggagtcaaaatcattgcaaaggactttgaaaaagctct agccggacttcctatgtatgtggccaagcgagatgacgaagtggagtattataaggaagagttatccacggctctgaaag atgtgctcagcggcattaagttatcagagaggggagtgttcgtgcaggcgtctacactcggatcacttgaagctctccta gagttccttagaacgtctaaaattccttatgcgggcattaatatcggacctgtccataaaaaggacattatgaaagcgtc tgtcatgattgaacatgatttgcaatatgctgtgattctggcatttgatgtcaaagtagaaagagaggctcaagaaatgg cggacagcgtcggcgtcaaaatcttcacagcagacattatttatcacttatttgacaaatttatagcatatcgtgatgaa ttcaaaaagaagaaacaagaagaattcaaacatatagctgtgtttccatgtaaactccgtgttctgcctcagtttatatt taattcccgtgaccccattgtggtcggtgtatgtgtagaagcagggttcgtcaaggaagggacgccactctgtgtaccaa gtaaagagggtgtagaattgggccgggttgtgtcagtagagaacaaccataaaccagtggataaggccactaagggaatg gaagtgtgtataaagatagaccccattcctggagacgctcctaagatgtacggacggcactttgatcatactgatctcct ctatagtaagatctctcgcgaatctatagatgcagttaagaattacttcagagaggaaatggctaaatcagactggcaac tcgtcatggagatgaaaaaactcttccagattctataa |
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Protein
| Protein ID | pfu_aug2.0_405.1_17398.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_405.1_17398.t1 MGKPKNKNKRNQGDDVEDNEVDLDPLANQTPDDDTSSKVATKSAGKKKKGKKKDDDWEDDVAEEIKALSLQSKGDLNESE EEEEIVVPVKKKEKKKKNKKVESDEEEEEEMKPKGTFQMLMIEDDDMVQSESDNEMEEKEDTPVIEAPKENTVKPQKKKD KKKDKKDTKQEEDIDALLAELDRPSEKSKKKKKKKGEEEETTEAAPATGTEEQQEVDIEAKMAEAKVVSIDDFDEEEDDK KKKKREKKKKAKKADAEQKDGEEEGEKQEGENEGEGEEGSVKTAAQKRKEKKEREKLKKQQEKKKSKSKGEGATGTEDQA EGDKEGEGKDDAEEDEGEEKEGKKKKKKGEKEEKKKKSKAPVAAIKAQLQKIKEEEERLKREEEERIRKEEEEERLREEQ KRLEEERKLKKKQKEKEKKQRLKEEGKLLTAKEKQDRRRALQLLEQMKAQGIDVPDKGESAEKDEAPVKKRPVYTNKKKK PQKQGKSREKYHEECEKNRSVDKLRAAVVCVLGHVDTGKTKILDKLRRTHVQDGEAGGITQQIGATNVPESAIREQTKMC KEIDRLYQWKTSPHTDVQNTIKKQSPHTKSEFDERAQEVIVQMAEQGINAALYYENKNPREYVSLVPTSAHSGDGMGNLI ALICELTQTMLAKRVSYSEELQATVMEVKALPGLGTTIDVILVNGHLRESDQIVVPGTEGPIVTHIRGLLMPQPMKELRV KSQWEHHKEVYAAQGVKIIAKDFEKALAGLPMYVAKRDDEVEYYKEELSTALKDVLSGIKLSERGVFVQASTLGSLEALL EFLRTSKIPYAGINIGPVHKKDIMKASVMIEHDLQYAVILAFDVKVEREAQEMADSVGVKIFTADIIYHLFDKFIAYRDE FKKKKQEEFKHIAVFPCKLRVLPQFIFNSRDPIVVGVCVEAGFVKEGTPLCVPSKEGVELGRVVSVENNHKPVDKATKGM EVCIKIDPIPGDAPKMYGRHFDHTDLLYSKISRESIDAVKNYFREEMAKSDWQLVMEMKKLFQIL |
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