Gene
| Gene Model ID | pfu_aug2.0_405.1_17399 |
|---|---|
| Locus | scaffold405.1 : 274717 ... 333657 : + |
| To GenomeBrowser | scaffold405.1:274717..333657 |
| Genes list of scaffold | scaffold405.1 |
| Synonym | pfu_aug1.0_27249.1_40661 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_405.1_17399.t1 | 3 | 1 | Fibrinogen_C | 612 | 653 | 3.4e-19 | 69.3 | 0.05 | 740.0 | -0.5 |
| pfu_aug2.0_405.1_17399.t1 | 3 | 2 | Fibrinogen_C | 779 | 811 | 3.4e-19 | 69.3 | 2.0e-08 | 0.0003 | 20.4 |
| pfu_aug2.0_405.1_17399.t1 | 3 | 3 | Fibrinogen_C | 875 | 964 | 3.4e-19 | 69.3 | 7.5e-18 | 1.1e-13 | 51.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_405.1_17399.t1 | gi|524895059|ref|XP_005104017.1| | PREDICTED: uncharacterized protein LOC101854267 [Aplysia californica] | 3.0e-14 |
| pfu_aug2.0_405.1_17399.t1 | gi|260814486|ref|XP_002601946.1| | hypothetical protein BRAFLDRAFT_86430 [Branchiostoma floridae] | 2.0e-10 |
| pfu_aug2.0_405.1_17399.t1 | gi|157114029|ref|XP_001657948.1| | AAEL006704-PA [Aedes aegypti] | 3.0e-09 |
| pfu_aug2.0_405.1_17399.t1 | gi|156398909|ref|XP_001638430.1| | predicted protein [Nematostella vectensis] | 9.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_405.1_17399.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_405.1_17399.t1 atggggaccaattgtgccccactccttgccgacattttcctttactcgtatgaagctgaattcattcaatctttggtccc tgaagggaaaagatacttagcttctgacttcaacttcacttacagatacatagacgatgtattgtccatcaataatccaa aattcgcggattacctgatcagtatctatcctccggagcttgaagtcaaagagactacagagacaaataattcagcatcc tatttggacataatgttgtcctatgacactgatggtcacatgaacacctcactctatgacaaacgtgacgacttcaattt tagcattacaaactttccttttctgagtagcaacatcccttcatcgcctgcttatggcatgttcatatctcagttgatac gctgtgctagagcaaatgagttaaagaagaaacctttggagcagtgtttgccagtttgtaccagtaactacagtgtatgt gtaaagttaagtacatcagagtacacatgtgtggagcttcatataggatgcaccattccagcgtataatgccaaaaatat agcggctgtgccggataatacctttatcaccgtaggacagtcttataaacatcaatgtataactggttacatcgccagag gaacgtcacagacgtgtacagaggctggagttctctcaccctcacagtctgacgtcacatgctttaaatcgttttcattc actggagactctacaatatgggcgttggtattccgtgtacagagtggagtgggtgtgtccgatcagaccatgtggtccac cacaggcacggcgcatgaaacagatactgctgtagggagtgagtgtgaggcggaaacgaagagctcatcctgtactgaca tatacaaaactagtgtcattgacgattggagtactttatccatatcaaaggtgaaactggctatttacacagactccgcc ggtctcgctcatcacgtgactttcaatgctgccggaagtactagttctgattggtggagtccttcaaatatccaatcatc ttcctggacagatatgacttccactgggtcatatagtccatttcaaatatctggaggtaatggcaatcgaggctttgaga tgacgagttactatagcggatgtggtaatgaccgtggctggtttctgagcacagccacttccggcgtgtgcggctttgac acacataccacgtatcctcagtttgtatattgcgcctcaacgacatcatgcgtgtataattcagttggtatgttttataa gtacggatgggagggtcagattaaagtacagaggtggaacatcgataacccgaggaaagcaagcaatgtacccttaagta acagcggtctgggcagtgttatgggatataactttgaggatttgaactgtgtttctacaatacccgaggagtttgttggt gctgtgggcgacatgcctattcttataccagaatcactcgcgcttccaccgaaagtgctggcttgtctttaccacagata cgtcacatccgttcaaacgttgtgcgcagaaccaaagttattcggccatgccaatgaggatggaggttacgtatgtgtcg acaaaaatattttaaacaaaaacgcttgtgaggtggttattttgggttccgtggtggattctcgatatataagccagctg aaaacgcagtatggatgtaatatccgcaacgtacagctgagcatgtttagggggaaaccaagtctgtttgtaacgatgag aaaatggatacctgaacaagtttctcagagaaataacattgacctgattgtcctcaatgtatcgtctgacagtgatgaaa tatacgccatgaatgagcttttacatcaagaaaacatcatgaaccggatcaaacagatatcactgaggattaacatcaac ccaatgaaaggcgagtcgttaattaagtatgaacaatggcttttgaactttaaacaaatttttaaactaaattttagaat attttcatataacagagaagtgaaatgccgaccaaattctatagaaaccagcaagttcctgtcgtgttacacaatgaagt ggatatatccatttttcgccacattaattagatttacggcgtgccagacactcatctctaatactgagtgcccggcactg gatgagttggttcgagtaaatgcaagaaatagcattgagttaagaaaggaaatggaagaactcaataaagagaaagagcg cttattaaaagaactgtcattacaaagagattggattaagagtatcctgcttcaaagcaatgggataatggattgtatgt ggtacaagatcatggatcctgacgcacagagtggagtgtataacctgatcgttagagatagggacttccaggcatattgt gacatggaaacagacggagggggatggacgattggaggggaggaaggtggagggagtgggcgggaaggggaggaagtgga ggggggaagcgggcgggagggggagagaggggatggagagaagggatggaggcgggagggaagggtagaaacggaaggga gggtggaaggtgtgaaaggaggcagaaaaagggctggaggatggaggaagggagagttaagtaagggatgggtcatcgta tcacgggaccctaagaaatctatgaatagatcatggcaggaatataaacatggctttggaaatgtggcaggaccatctta ctggattggaaatgacaacattcatgaactaaccaagcagagaccgtctgatgtctacattataacagaacataaaccat atgggtcgaaatggttaaaatacacaaacatgacggtcctatcagaggaatacaaatacagattctctttcgatgagaat tcatatgaaggaaatcata |
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Protein
| Protein ID | pfu_aug2.0_405.1_17399.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_405.1_17399.t1 MGTNCAPLLADIFLYSYEAEFIQSLVPEGKRYLASDFNFTYRYIDDVLSINNPKFADYLISIYPPELEVKETTETNNSAS YLDIMLSYDTDGHMNTSLYDKRDDFNFSITNFPFLSSNIPSSPAYGMFISQLIRCARANELKKKPLEQCLPVCTSNYSVC VKLSTSEYTCVELHIGCTIPAYNAKNIAAVPDNTFITVGQSYKHQCITGYIARGTSQTCTEAGVLSPSQSDVTCFKSFSF TGDSTIWALVFRVQSGVGVSDQTMWSTTGTAHETDTAVGSECEAETKSSSCTDIYKTSVIDDWSTLSISKVKLAIYTDSA GLAHHVTFNAAGSTSSDWWSPSNIQSSSWTDMTSTGSYSPFQISGGNGNRGFEMTSYYSGCGNDRGWFLSTATSGVCGFD THTTYPQFVYCASTTSCVYNSVGMFYKYGWEGQIKVQRWNIDNPRKASNVPLSNSGLGSVMGYNFEDLNCVSTIPEEFVG AVGDMPILIPESLALPPKVLACLYHRYVTSVQTLCAEPKLFGHANEDGGYVCVDKNILNKNACEVVILGSVVDSRYISQL KTQYGCNIRNVQLSMFRGKPSLFVTMRKWIPEQVSQRNNIDLIVLNVSSDSDEIYAMNELLHQENIMNRIKQISLRININ PMKGESLIKYEQWLLNFKQIFKLNFRIFSYNREVKCRPNSIETSKFLSCYTMKWIYPFFATLIRFTACQTLISNTECPAL DELVRVNARNSIELRKEMEELNKEKERLLKELSLQRDWIKSILLQSNGIMDCMWYKIMDPDAQSGVYNLIVRDRDFQAYC DMETDGGGWTIGGEEGGGSGREGEEVEGGSGREGERGDGEKGWRREGRVETEGRVEGVKGGRKRAGGWRKGELSKGWVIV SRDPKKSMNRSWQEYKHGFGNVAGPSYWIGNDNIHELTKQRPSDVYIITEHKPYGSKWLKYTNMTVLSEEYKYRFSFDEN SYEGNH |
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