Gene
| Gene Model ID | pfu_aug2.0_4050.1_02552 |
|---|---|
| Locus | scaffold4050.1 : 36596 ... 47215 : + |
| To GenomeBrowser | scaffold4050.1:36596..47215 |
| Genes list of scaffold | scaffold4050.1 |
| Synonym | pfu_aug1.0_16308.1_39804 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nanos homolog 1 | GO:0003723 GO:0005515 GO:0005634 GO:0007281 GO:0008270 GO:0017148 GO:0036464 GO:0048471 GO:1900153 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4050.1_02552.t1 | 3 | 1 | zf-nanos | 59 | 66 | 1.6e-25 | 88.8 | 1.7 | 5000.0 | -2.5 |
| pfu_aug2.0_4050.1_02552.t1 | 3 | 2 | zf-nanos | 119 | 172 | 1.6e-25 | 88.8 | 5.3e-29 | 1.6e-25 | 88.8 |
| pfu_aug2.0_4050.1_02552.t1 | 3 | 3 | zf-nanos | 173 | 183 | 1.6e-25 | 88.8 | 0.83 | 2500.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4050.1_02552.t1 | gi|676424031|ref|XP_009044182.1| | hypothetical protein LOTGIDRAFT_102354 [Lottia gigantea] | 3.0e-21 |
| pfu_aug2.0_4050.1_02552.t1 | gi|591379503|ref|XP_007064298.1| | PREDICTED: nanos homolog 1 [Chelonia mydas] | 3.0e-19 |
| pfu_aug2.0_4050.1_02552.t1 | gi|157412320|ref|NP_001098700.1| | nanos-M [Bombyx mori] | 5.0e-19 |
| pfu_aug2.0_4050.1_02552.t1 | gi|157412324|ref|NP_001098702.1| | nanos-like protein [Bombyx mori] | 6.0e-19 |
| pfu_aug2.0_4050.1_02552.t1 | gi|725555161|ref|XP_010331650.1| | PREDICTED: nanos homolog 1, partial [Saimiri boliviensis boliviensis] | 7.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_4050.1_02552.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4050.1_02552.t1 atgtcaaagggtccagctctctccaaacaacttgacaacctgcttgacggtcgcaacaaccttgatccactcaatgacac cttgatggacgatagcttcagagagcacttcacctacgcggcaccccaaacgactacacactgccatgatcgtgacttac cacctacattcatcaaccacacaaccaatattcattcacatacaacagatgctagcctatctacctatttcccgtactgt gctgacattgcgccaccaaagaagtcacgtttaccgtcatctaccaatatggatgttgtcattgatgctggactacttaa tccgaatcaacgacttcagtatgacgagaagttttgtgctctgtgtaagcgtaacggtgaagccagagagttctacacta ctcacgttctgaaagacaaccgtggtaaagttgtgtgtcctatccttcgtaaatatgtgtgtccgaaatgtggtgccacc ggcgataacagccatactatcaagcactgcccgaccaccagggaccgttctcacaacaaccaacactgctaa |
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Protein
| Protein ID | pfu_aug2.0_4050.1_02552.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4050.1_02552.t1 MSKGPALSKQLDNLLDGRNNLDPLNDTLMDDSFREHFTYAAPQTTTHCHDRDLPPTFINHTTNIHSHTTDASLSTYFPYC ADIAPPKKSRLPSSTNMDVVIDAGLLNPNQRLQYDEKFCALCKRNGEAREFYTTHVLKDNRGKVVCPILRKYVCPKCGAT GDNSHTIKHCPTTRDRSHNNQHC |
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