Gene
| Gene Model ID | pfu_aug2.0_4055.1_19249 |
|---|---|
| Locus | scaffold4055.1 : 1 ... 48686 : + |
| To GenomeBrowser | scaffold4055.1:1..48686 |
| Genes list of scaffold | scaffold4055.1 |
| Synonym | pfu_aug1.0_14574.1_03519 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| apoptosis-resistant e3 ubiquitin protein ligase 1 isoform x1 | GO:0004842 GO:0016567 GO:0016874 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4055.1_19249.t1 | 2 | 1 | Filamin | 271 | 368 | 3.4e-10 | 40.3 | 2.7e-13 | 1.0e-09 | 38.8 |
| pfu_aug2.0_4055.1_19249.t1 | 2 | 1 | HECT | 322 | 493 | 0.0 | 182.2 | 5.3e-21 | 2.0e-17 | 63.3 |
| pfu_aug2.0_4055.1_19249.t1 | 2 | 2 | Filamin | 393 | 426 | 3.4e-10 | 40.3 | 0.98 | 3600.0 | -1.5 |
| pfu_aug2.0_4055.1_19249.t1 | 2 | 2 | HECT | 493 | 582 | 0.0 | 182.2 | 1.5e-37 | 5.5e-34 | 117.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4055.1_19249.t1 | gi|524893868|ref|XP_005103442.1| | PREDICTED: apoptosis-resistant E3 ubiquitin protein ligase 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_4055.1_19249.t1 | gi|585692695|ref|XP_006821499.1| | PREDICTED: apoptosis-resistant E3 ubiquitin protein ligase 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_4055.1_19249.t1 | gi|556947271|ref|XP_005986695.1| | PREDICTED: apoptosis-resistant E3 ubiquitin protein ligase 1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_4055.1_19249.t1 | gi|665815529|ref|XP_008556425.1| | PREDICTED: apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X1 [Microplitis demolitor] | 0.0 |
| pfu_aug2.0_4055.1_19249.t1 | gi|665815537|ref|XP_008556429.1| | PREDICTED: apoptosis-resistant E3 ubiquitin protein ligase 1 isoform X2 [Microplitis demolitor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4055.1_19249.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4055.1_19249.t1 cttttctagatggagatttatcagcagtggacctatcctatctccatcagttaccatctgatgttaaacgatcactggca gctgctgtcaacaacgctaaagataaagttacacttgtattgtggctgtctcaagtcaaacatgtcaactttgatgtcat agccaggatgttccatgttgctgacttcaactttgataaactacaacgttatgaggacgacgagctttatggttttgtat cagatgaaagtgacagtgtgggtcagtacaaaaacctggtgcaggcagcaagggagtccagacatatcaatctacgttac atcgataccaacagcttgctgaacacgtacagggcagcgtcttactcatcctctgggtcctcggtactagtgctgtttat aaagtttgttttgattacgctgatcagcattgtcgccttgtatgcattggcgggacttgtcttcgttgccttcatcctgt ttaccatgagcgtcatagctacgtcactgagacagaacatccggttttcttcctccacgcagtacatccaggagcgcctc ggactcaacaacccgtcgttcggcatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nggggcccgtgtcacgtgacagtggcggtggtggtgagacggctaacaacaagagttggtggtggcgcctgttttggggc cacaatctcttcccacagtcatgtgtggtcaagtgggactggcaggaaccgcaaatggtcggaagcacaatgtcttttaa tattgagttgttccggaaggacggaaagccattcgttaccaaggatacgaattctatattcgtagaaattcgtcaccacg gaaataaagtggcgtgtaccaagcagttagagagtgaagatgccggctctaacaaagtgagggtctccttcactgttcac aagtcaggaacctatgagatctccattatggtgtcagggagacacgtgaagaatagtccctttaccaaagtgttcgaacc agggccaatcgacgccgcccgtacgggctttacaaactactgttctacaatcgtctgcacggcagggcagtcacaccctc tcactatagagacacaggattcctttgggaaccccgccctgtacaaggcagatcaaaataactacttcaaaatcagggtg gtggaggtagtggatctgatacccaatggtagtaagataccggtaaccaacgacaacaaagtacagtaccttaacgccct ggctcagtataaactagcgaacaacgtccgtgaggaagtggatacgttccttagaggcctcaacacgctcattcctgaca atctactcagtatatttgacgaaaatgaacttgagattctagattggttttggaccatagtggcaagctttacagaggag caaatggctcgcttactccagtttactaccgggtgttcacagttaccaccaggagggtttgccgaccttaatccaaaatt ccaaatctcattcgcacctacgtacaatgctctacctacagctcatacatgttttaaccagttgtgcctgcctgactatg gatccatagaacattttcaccaatctctgctcatcgctatcaatgaaggatcccaggggttcggcttagtgtag |
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Protein
| Protein ID | pfu_aug2.0_4055.1_19249.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4055.1_19249.t1 FLDGDLSAVDLSYLHQLPSDVKRSLAAAVNNAKDKVTLVLWLSQVKHVNFDVIARMFHVADFNFDKLQRYEDDELYGFVS DESDSVGQYKNLVQAARESRHINLRYIDTNSLLNTYRAASYSSSGSSVLVLFIKFVLITLISIVALYALAGLVFVAFILF TMSVIATSLRQNIRFSSSTQYIQERLGLNNPSFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GPVSRDSGGGGETANNKSWWWRLFWGHNLFPQSCVVKWDWQEPQMVGSTMSFNIELFRKDGKPFVTKDTNSIFVEIRHHG NKVACTKQLESEDAGSNKVRVSFTVHKSGTYEISIMVSGRHVKNSPFTKVFEPGPIDAARTGFTNYCSTIVCTAGQSHPL TIETQDSFGNPALYKADQNNYFKIRVVEVVDLIPNGSKIPVTNDNKVQYLNALAQYKLANNVREEVDTFLRGLNTLIPDN LLSIFDENELEILDWFWTIVASFTEEQMARLLQFTTGCSQLPPGGFADLNPKFQISFAPTYNALPTAHTCFNQLCLPDYG SIEHFHQSLLIAINEGSQGFGLV |
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