Gene
| Gene Model ID | pfu_aug2.0_4073.1_12581 |
|---|---|
| Locus | scaffold4073.1 : 43577 ... 44305 : - |
| To GenomeBrowser | scaffold4073.1:43577..44305 |
| Genes list of scaffold | scaffold4073.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4073.1_12581.t1 | 2 | 1 | DUF4326 | 7 | 68 | 7.4e-14 | 52.0 | 1.0e-17 | 7.4e-14 | 52.0 |
| pfu_aug2.0_4073.1_12581.t1 | 2 | 2 | DUF4326 | 102 | 130 | 7.4e-14 | 52.0 | 0.19 | 1400.0 | -0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4073.1_12581.t1 | gi|470511612|ref|XP_004351685.1| | hypothetical protein ACA1_398940 [Acanthamoeba castellanii str. Neff] | 2.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_4073.1_12581.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4073.1_12581.t1 atgggaagtattgtgggcaacaaatggagcaatccttatacctgtcaccctaggatgggagctaaagaattccagaaatg catgaggctatatgaacagcatatcagagacaacttatggaacaatttacacgaattgaaagggaagactctgggttgct ggtgctacccctatccgtgtcatgcagacattttaaaaaggctgtatgaggagatgatgtccaagaggttggaggaggac gagaaggctgctagctggttggaatggaagaaggttagtttttctgacgatgtacaagtcattgacgacgaggaaatgtc gcaagtattcgatgagaagatggatgaaagaacacaggaagacaagatggcggccgatagactcgtcgaaatcatggaag aagaggacaggaagaaggaagggaagaagagaatgtttggatcatcgttcggacaatataaaataaagaaggattacgga ggttgtgtatgcctagttaggaaaagaccatctgtcgctaagaaggaactatctatttctaaagagccgcccatggcctt aaaaactgattatgattttgatatgaatgaatttttacatcctaagaaaaagaagaaaataaagaaagattaa |
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Protein
| Protein ID | pfu_aug2.0_4073.1_12581.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4073.1_12581.t1 MGSIVGNKWSNPYTCHPRMGAKEFQKCMRLYEQHIRDNLWNNLHELKGKTLGCWCYPYPCHADILKRLYEEMMSKRLEED EKAASWLEWKKVSFSDDVQVIDDEEMSQVFDEKMDERTQEDKMAADRLVEIMEEEDRKKEGKKRMFGSSFGQYKIKKDYG GCVCLVRKRPSVAKKELSISKEPPMALKTDYDFDMNEFLHPKKKKKIKKD |
|