Gene
| Gene Model ID | pfu_aug2.0_408.1_27351 |
|---|---|
| Locus | scaffold408.1 : 27436 ... 58970 : + |
| To GenomeBrowser | scaffold408.1:27436..58970 |
| Genes list of scaffold | scaffold408.1 |
| Synonym | pfu_aug1.0_63.1_14768 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_408.1_27351.t3 | 1 | 1 | RBP_receptor | 32 | 649 | 0.0 | 362.2 | 0.0 | 0.0 | 362.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_408.1_27351.t3 | gi|156353390|ref|XP_001623050.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_408.1_27351.t3 | gi|632938760|ref|XP_007906270.1| | PREDICTED: stimulated by retinoic acid gene 6 protein homolog [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_408.1_27351.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_408.1_27351.t1 atgacgtactttatgttcttctacaacatcttcattggtttggtatcgtgtcttttgcgcatccttaaatctatgatcct cggttcattgttcataccgcggcttgaccatagtgtattaccgaggaaattccagagatttgatcctggattccatgcct tctgtgggtttatgcatgttgaaagcgcgcatacccacccggtcataatggtgtttatcagtattttacaagcagagtcc ttcaacactctcaaagctaacagtgaaaaaccctcactcaagtctatgatgggtaagggcattgctaccgtgaatggtac atatgatatggcacagagtaaacgcagcagaaaggcccgatggaagtggttattagcctataccctgatccagaacccca ccctgtgtctggagagaaagatagcactggctaaacagaaaaatgagtcaattataatgacagtgttacaggataattac gaggcgactccagcggaggaaaaaatcgacatccaaatctga |
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| Transcript ID | pfu_aug2.0_408.1_27351.t2 |
| Definition | - |
>pfu_aug2.0_408.1_27351.t2 atggcggatttgttgtatctgtgggactatatacaacgggacctcatcctagcaggggaccaaaactacactgaagagcc tatagaaatcacagagatatgttatcctcagttcccagaggaccagttcaggacggtggctgtagtccctgcgttcatat gtgccgtgatcctagccttcacacagaagaggaggtacctgaagcggtcattcctaagagggagacccggtctagtgcat cctatggacgtgttgagtcgctcacaccgattctcttacgctgcagcattcggaatcctgagtaacctgtgttttaacgt tattgtcaaccagcagtacgctttcgaatatgacgggccaacgtacttcaaagtatttgtggttctcctgaccatgttga tcaatggggtaacatactatccactgttcgcggctttggccgtacagaactcgctcggctactttattgggacactgttt gcctgggcgtacgccggtgtttatatctccaacaccttcatctgtacttacaatgcgataaacttcgtgacattgttcat aaacgaaggccccattatgctgtgccatttgtacctgattttcagtctacctattcgatttgtttggtcattcaaacgga aaagaaaactgaagtttgcagtggattttgacagctctgctgatctttacgattcaataaggaattcctaccagggaatt catgtcaggaagctgtatgctaaacctcctccccctccaagtcctccggttggtttctgtcaaaaggtcacccatctcat caagacactctttcaaaaaatcgtctacaaacgagaaaacaattttcgctattcaactaggatggtgtccgtcttaacag tttccttcattgttatctacaatatcaccgtgggttctatacgttacgtagtttggttgactggagagattatgaagatg attgacaaaggaataaattatgtagactacttgacaatcctgagaggttacgaacaagaagcaactgaactgctcaatgc tgccaagtactcagttttctgtgtccgagtgattttactgatcacacttcccctgacgtttgtgataggtgttgtgatga ttgtgcaatcattagctaattacaggtacctcctgaggaagctgtatgcacggaattattgtcacctgacccctaaggat gagataggcaactcctccgccttggttggcagcatgaggtatgctggatatcaagtgggatacattgtatggggatttct ggtccagtttctgctgttgacttaa |
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| Transcript ID | pfu_aug2.0_408.1_27351.t3 |
| Definition | - |
>pfu_aug2.0_408.1_27351.t3 atggcggatttgttgtatctgtgggactatatacaacgggacctcatcctagcaggggaccaaaactacactgaagagcc tatagaaatcacagagatatgttatcctcagttcccagaggaccagttcaggacggtggctgtagtccctgcgttcatat gtgccgtgatcctagccttcacacagaagaggaggtacctgaagcggtcattcctaagagggagacccggtctagtgcat cctatggacgtgttgagtcgctcacaccgattctcttacgctgcagcattcggaatcctgagtaacctgtgttttaacgt tattgtcaaccagcagtacgctttcgaatatgacgggccaacgtacttcaaagtatttgtggttctcctgaccatgttga tcaatggggtaacatactatccactgttcgcggctttggccgtacagaactcgctcggctactttattgggacactgttt gcctgggcgtacgccggtgtttatatctccaacaccttcatctgtacttacaatgcgataaacttcgtgacattgttcat aaacgaaggccccattatgctgtgccatttgtacctgattttcagtctacctattcgatttgtttggtcattcaaacgga aaagaaaactgaagtttgcagtggattttgacagctctgctgatctttacgattcaataaggaattcctaccagggaatt catgtcaggaagctgtatgctaaacctcctccccctccaagtcctccggttggtttctgtcaaaaggtcacccatctcat caagacactctttcaaaaaatcgtctacaaacgagaaaacaattttcgctattcaactaggatggtgtccgtcttaacag tttccttcattgttatctacaatatcaccgtgggttctatacgttacgtagtttggttgactggagagattatgaagatg attgacaaaggaataaattatgtagactacttgacaatcctgagaggttacgaacaagaagcaactgaactgctcaatgc tgccaagtactcagttttctgtgtccgagtgattttactgatcacacttcccctgacgtttgtgataggtgttgtgatga ttgtgcaatcattagctaattacaggtacctcctgaggaagctgtatgcacggaattattgtcacctgacccctaaggat gagataggcaactcctccgccttggttggcagcatgaggtatgctggatatcaagtgggatacattgtatggggatttct gatccagtttctgctgttgaccttagtggcttcgattctaactgccgtcatacagctttggtcattcctggacacctgga ttattgacaaaatacatgccctttggccagtacttctgaccagtttcgttgtaaatataatacaattgctcttggcaaag ttctttttcctgcaagaaagaggcgaacaactggccattgagaacaggacttttctcctctgtttcaggcggctattctt catcatgacgtactttatgttcttctacaacatcttcattggtttggtatcgtgtcttttgcgcatccttaaatctatga tcctcggttcattgttcataccgcggcttgaccatagtgtattaccgaggaaattccagagatttgatcctggattccat gccttctgtgggtttatgcatgttgaaagcgcgcatacccacccggtcataatggtgtttatcagtattttacaagcaga gtccttcaacactctcaaagctaacagtgaaaaaccctcactcaagtctatgatgggtaagggcattgctaccgtgaatg gtacatatgatatggcacagagtaaacgcagcagaaaggcccgatggaagtggttattagcctataccctgatccagaac cccaccctgtgtctggagagaaagatagcactggctaaacagaaaaatgagtcaattataatgacagtgttacaggataa ttacgaggcgactccagcggaggaaaaaatcgacatccaaatctga |
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Protein
| Protein ID | pfu_aug2.0_408.1_27351.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_408.1_27351.t1 MTYFMFFYNIFIGLVSCLLRILKSMILGSLFIPRLDHSVLPRKFQRFDPGFHAFCGFMHVESAHTHPVIMVFISILQAES FNTLKANSEKPSLKSMMGKGIATVNGTYDMAQSKRSRKARWKWLLAYTLIQNPTLCLERKIALAKQKNESIIMTVLQDNY EATPAEEKIDIQI |
|
| Protein ID | pfu_aug2.0_408.1_27351.t2 |
| Definition | - |
>pfu_aug2.0_408.1_27351.t2 MADLLYLWDYIQRDLILAGDQNYTEEPIEITEICYPQFPEDQFRTVAVVPAFICAVILAFTQKRRYLKRSFLRGRPGLVH PMDVLSRSHRFSYAAAFGILSNLCFNVIVNQQYAFEYDGPTYFKVFVVLLTMLINGVTYYPLFAALAVQNSLGYFIGTLF AWAYAGVYISNTFICTYNAINFVTLFINEGPIMLCHLYLIFSLPIRFVWSFKRKRKLKFAVDFDSSADLYDSIRNSYQGI HVRKLYAKPPPPPSPPVGFCQKVTHLIKTLFQKIVYKRENNFRYSTRMVSVLTVSFIVIYNITVGSIRYVVWLTGEIMKM IDKGINYVDYLTILRGYEQEATELLNAAKYSVFCVRVILLITLPLTFVIGVVMIVQSLANYRYLLRKLYARNYCHLTPKD EIGNSSALVGSMRYAGYQVGYIVWGFLVQFLLLT |
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| Protein ID | pfu_aug2.0_408.1_27351.t3 |
| Definition | - |
>pfu_aug2.0_408.1_27351.t3 MADLLYLWDYIQRDLILAGDQNYTEEPIEITEICYPQFPEDQFRTVAVVPAFICAVILAFTQKRRYLKRSFLRGRPGLVH PMDVLSRSHRFSYAAAFGILSNLCFNVIVNQQYAFEYDGPTYFKVFVVLLTMLINGVTYYPLFAALAVQNSLGYFIGTLF AWAYAGVYISNTFICTYNAINFVTLFINEGPIMLCHLYLIFSLPIRFVWSFKRKRKLKFAVDFDSSADLYDSIRNSYQGI HVRKLYAKPPPPPSPPVGFCQKVTHLIKTLFQKIVYKRENNFRYSTRMVSVLTVSFIVIYNITVGSIRYVVWLTGEIMKM IDKGINYVDYLTILRGYEQEATELLNAAKYSVFCVRVILLITLPLTFVIGVVMIVQSLANYRYLLRKLYARNYCHLTPKD EIGNSSALVGSMRYAGYQVGYIVWGFLIQFLLLTLVASILTAVIQLWSFLDTWIIDKIHALWPVLLTSFVVNIIQLLLAK FFFLQERGEQLAIENRTFLLCFRRLFFIMTYFMFFYNIFIGLVSCLLRILKSMILGSLFIPRLDHSVLPRKFQRFDPGFH AFCGFMHVESAHTHPVIMVFISILQAESFNTLKANSEKPSLKSMMGKGIATVNGTYDMAQSKRSRKARWKWLLAYTLIQN PTLCLERKIALAKQKNESIIMTVLQDNYEATPAEEKIDIQI |
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