Gene
| Gene Model ID | pfu_aug2.0_408.1_27354 |
|---|---|
| Locus | scaffold408.1 : 95596 ... 98163 : + |
| To GenomeBrowser | scaffold408.1:95596..98163 |
| Genes list of scaffold | scaffold408.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_408.1_27354.t1 | 1 | 1 | Arf | 2 | 126 | 8.4e-09 | 34.9 | 5.6e-12 | 9.2e-09 | 34.7 |
| pfu_aug2.0_408.1_27354.t1 | 1 | 1 | Ras | 5 | 165 | 0.0 | 189.1 | 0.0 | 0.0 | 188.9 |
| pfu_aug2.0_408.1_27354.t1 | 1 | 1 | Miro | 5 | 119 | 1.8e-20 | 73.6 | 1.7e-23 | 2.8e-20 | 72.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_408.1_27354.t1 | gi|676463240|ref|XP_009056533.1| | hypothetical protein LOTGIDRAFT_232941 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_408.1_27354.t1 | gi|524897756|ref|XP_005105335.1| | PREDICTED: ras-related protein Rap-2a-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_408.1_27354.t1 | gi|755960208|ref|XP_011304663.1| | PREDICTED: ras-related protein Rap-2c [Fopius arisanus] | 0.0 |
| pfu_aug2.0_408.1_27354.t1 | gi|645032616|ref|XP_008214787.1| | PREDICTED: ras-related protein Rap-2a [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_408.1_27354.t1 | gi|91092178|ref|XP_968474.1| | PREDICTED: ras-related protein Rap-2c [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_408.1_27354.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_408.1_27354.t1 atgagggaatataaggtagttgttttaggaagtgggggagtgggtaaaagtgctttaactgtaaagtttgtgtctggaac atttatggaaaaatacgacccaactatagaggatttttacaggaaagagatcgaagtagaccaggctccctctgtgctag aaatcctggatacagccggaactgaacagtttgcttcaatgagagatttgtatataaagaatggacagggttttgctata gtatatagtattacaagtttacagacatttcaagacattaaaacaatgaaagaacagataatccgtgtgaaagggattga aaacatcccgatgatacttgtcggaaacaaagctgatttagagcatcaacgagaggtgcctacgtcggagggacaaatgc ttgcacaaacatggaattgcccatttttagaaacatcggccaaaaatactcaaaatgtgaatgaaatcttcatcgaaatt gtacgagaaatgaacactagtcctgttaaagaaaagagaaagtgttgcagttgtgtattgttatga |
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Protein
| Protein ID | pfu_aug2.0_408.1_27354.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_408.1_27354.t1 MREYKVVVLGSGGVGKSALTVKFVSGTFMEKYDPTIEDFYRKEIEVDQAPSVLEILDTAGTEQFASMRDLYIKNGQGFAI VYSITSLQTFQDIKTMKEQIIRVKGIENIPMILVGNKADLEHQREVPTSEGQMLAQTWNCPFLETSAKNTQNVNEIFIEI VREMNTSPVKEKRKCCSCVLL |
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