Gene
| Gene Model ID | pfu_aug2.0_408.1_27361 |
|---|---|
| Locus | scaffold408.1 : 214990 ... 248143 : - |
| To GenomeBrowser | scaffold408.1:214990..248143 |
| Genes list of scaffold | scaffold408.1 |
| Synonym | pfu_aug1.0_6202.1_38281 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_408.1_27361.t1 | 1 | 1 | PA | 176 | 269 | 4.6e-08 | 32.6 | 6.2e-11 | 1.3e-07 | 31.2 |
| pfu_aug2.0_408.1_27361.t1 | 2 | 1 | Peptidase_M28 | 514 | 583 | 5.4e-12 | 45.8 | 1.2e-13 | 2.6e-10 | 40.3 |
| pfu_aug2.0_408.1_27361.t1 | 2 | 2 | Peptidase_M28 | 619 | 660 | 5.4e-12 | 45.8 | 0.042 | 89.0 | 2.7 |
| pfu_aug2.0_408.1_27361.t1 | 1 | 1 | TFR_dimer | 726 | 811 | 5.0e-20 | 71.3 | 7.0e-23 | 1.5e-19 | 69.8 |
| pfu_aug2.0_408.1_27361.t1 | 1 | 1 | adh_short | 810 | 970 | 1.5e-30 | 106.2 | 1.2e-33 | 2.5e-30 | 105.5 |
| pfu_aug2.0_408.1_27361.t1 | 1 | 1 | KR | 810 | 967 | 3.4e-11 | 43.1 | 2.8e-14 | 5.8e-11 | 42.3 |
| pfu_aug2.0_408.1_27361.t1 | 1 | 1 | adh_short_C2 | 812 | 992 | 4.7e-25 | 88.7 | 4.5e-28 | 9.6e-25 | 87.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_408.1_27361.t1 | gi|260822809|ref|XP_002606794.1| | hypothetical protein BRAFLDRAFT_123151 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_408.1_27361.t1 | gi|514788960|ref|XP_005029634.1| | PREDICTED: glutamate carboxypeptidase 2-like isoform X4 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_408.1_27361.t1 | gi|699667002|ref|XP_009899819.1| | PREDICTED: glutamate carboxypeptidase 2-like, partial [Picoides pubescens] | 0.0 |
| pfu_aug2.0_408.1_27361.t1 | gi|514788948|ref|XP_005029631.1| | PREDICTED: glutamate carboxypeptidase 2-like isoform X1 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_408.1_27361.t1 | gi|224043657|ref|XP_002188120.1| | PREDICTED: putative N-acetylated-alpha-linked acidic dipeptidase [Taeniopygia guttata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_408.1_27361.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_408.1_27361.t1 atgtcgctggagtcccaggagagaaagtctaaaagttctgggtttacacgatgccattttgtcctgatcgtagtcgtggg ggtattagctctggcgttagggatcctcattggttacctcatcaccaggggcgaagccaaatctgatccacccaatccgg aagtatctagtacccaggctagtagtcaaagacaacgtgaaatcgacatcattatgaagaaactgaacaaagataacata aaaaagaacttaagaatatatgctagtcgtccacggatggcagggactgccgggggatatgagctggagaaactactata caacacgtggaaggatcacggattagaccatgttagggaagcctcgtatgatgtactgttgtcctaccctaatacatcaa accctaacagagtacaacttttggagaatgatcaagtgatatttcagtctgcactaaaagaagacctactaggcacagag cagcacagtgatgaaataatccctccattcaatgcatatgctgcagcaggtgtggctgagggtgagctgatctatgtcaa ctatggaagaatagaagacttcaagtttcttgagaccaacaaatccatgacctttaaaggcaagattgctatagctagat atggcaagatctttagaggggataaggttaaaattgctcaacagtttaactgctcagggataataatgtacactgacccc tctgacttcaatataaactctggaccaaacagtacagtatacccagactcatggtggatgccagggagtggggtacagag aggaactgtgggtgatgatggggattacctcacaccgttctacccagctacagctacaggtacatctcgctactcagcta taggtacatctcacaccattctacccagcgacagctacaggtacatctcacaccattctacccagctacaggtatatata cctcacaccattctacccagctacagggacatatataaactcataccattctactcagctacaggtacatctcactactc agctataggtacatctcacaccattctacccagcgacaggtacatctcacatcattctacccagctacaggtacatataa tatataactcactccattctattccgctacaggtacatctcacaccattctacccagatactggtatatacaataaatct caccattctacccagctacaggtacatataatatataactcgatcacaccattctactccgctacagattatgcacatag aattaaaaaagaagatattaaaaccttcaccatcccagctcagcctattggatatggtgatgcctggaatttactcagag taatggctggagaggaagttccagagtcttggaggggtaaactgaatatcacatacagatttggtcctggatacactaga caaaatctaaaagtgcgcttggaagttaacaattatgaagaagtaaggaaagtctcaaatatcataggttacgtgagggg gagtgtggagccagacaggtatattttgctgggtaaccatcatgatgcctgggtgtatggtgctatagatccactgtcag gtacagcagtagcatcagagattacccgcgtcctaggagagatgataaaagaaggtataagacccaggaggactatagtg gtgtgtgcctggggggctgaggaacacggactgctaggatcagtggaatgggtggaggtacccaatgctgacaccagtag tcctaacaaaactttgtactcaatatggctacagagagattccatggatgatgatttaaacagagggaaaattccaagtg tgtactattcccttggatcgggcagtgatatggcatcattttaccagagggcaggtgtacccagtgtagacatgtggtat gattatgattataatctctgggacaccctgtcctatcctgtataccattctcagtatgagacagtgtatctatatgaaaa cttcattgatccaagttataactatacactcagtgtggctcagctatggaccatatttgcatggaatcttgccaatgatg aaattttaacctttgatacaagaagatatgcagcagctatatcatcatttataaaacaactacgtaaaaactttggagaa gaatggagaaaacataatataacattaactgatttagaaactgcagcacaacaacttacaaaagtaacaaatgatttcca atcaaaagtagataaactaaggaattcaccagacacaagtgaactggagaaaagaatgatcaatgatagactgatacagt ttgaacgagcatttattgatcccgagggactccctggccgtagaatttataaacatgtgatgtttgctccgagtaaatat gatgcttattctgacaatagtttccctggtgccagttctggtataggtcaaggaacagctatactattctgtaaacttgg agccgaggtcgctatcactggtagaaatgaggagaatctctggaaaacagcagcagaatgtgaaaaacaaaatggaaaaa aggccttggccattacagctgaccttgcaaaggaggatgacactcagaaagtgatagagaaaacaatagaacatttcaag aaactagacatattggttaactctgcaggaatcgtggcgacaggtaccatagaaaccacatcactgcagcaatacgatca tgtgatgaatatcaatgtaaggtccatgtaccatctaaccatgttagcagttcctcatctggtaaagactaaaggcagca tagttaatgtatccagtgtcaatggcatgagatcatttccaggagttttggcctactgtatgtcaaagagtgctgtggac cagttcacaagatgtattgctcttgaacttgcttccaaacaagtgcgagtaaatagtgtaaacccaggtgtgattattac ggagatacacaagcgaggaggcatggatgaagaggcttatcaaaaggttaggatggttcaaatatag |
|
Protein
| Protein ID | pfu_aug2.0_408.1_27361.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_408.1_27361.t1 MSLESQERKSKSSGFTRCHFVLIVVVGVLALALGILIGYLITRGEAKSDPPNPEVSSTQASSQRQREIDIIMKKLNKDNI KKNLRIYASRPRMAGTAGGYELEKLLYNTWKDHGLDHVREASYDVLLSYPNTSNPNRVQLLENDQVIFQSALKEDLLGTE QHSDEIIPPFNAYAAAGVAEGELIYVNYGRIEDFKFLETNKSMTFKGKIAIARYGKIFRGDKVKIAQQFNCSGIIMYTDP SDFNINSGPNSTVYPDSWWMPGSGVQRGTVGDDGDYLTPFYPATATGTSRYSAIGTSHTILPSDSYRYISHHSTQLQVYI PHTILPSYRDIYKLIPFYSATGTSHYSAIGTSHTILPSDRYISHHSTQLQVHIIYNSLHSIPLQVHLTPFYPDTGIYNKS HHSTQLQVHIIYNSITPFYSATDYAHRIKKEDIKTFTIPAQPIGYGDAWNLLRVMAGEEVPESWRGKLNITYRFGPGYTR QNLKVRLEVNNYEEVRKVSNIIGYVRGSVEPDRYILLGNHHDAWVYGAIDPLSGTAVASEITRVLGEMIKEGIRPRRTIV VCAWGAEEHGLLGSVEWVEVPNADTSSPNKTLYSIWLQRDSMDDDLNRGKIPSVYYSLGSGSDMASFYQRAGVPSVDMWY DYDYNLWDTLSYPVYHSQYETVYLYENFIDPSYNYTLSVAQLWTIFAWNLANDEILTFDTRRYAAAISSFIKQLRKNFGE EWRKHNITLTDLETAAQQLTKVTNDFQSKVDKLRNSPDTSELEKRMINDRLIQFERAFIDPEGLPGRRIYKHVMFAPSKY DAYSDNSFPGASSGIGQGTAILFCKLGAEVAITGRNEENLWKTAAECEKQNGKKALAITADLAKEDDTQKVIEKTIEHFK KLDILVNSAGIVATGTIETTSLQQYDHVMNINVRSMYHLTMLAVPHLVKTKGSIVNVSSVNGMRSFPGVLAYCMSKSAVD QFTRCIALELASKQVRVNSVNPGVIITEIHKRGGMDEEAYQKVRMVQI |
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