Gene
| Gene Model ID | pfu_aug2.0_409.1_30733 |
|---|---|
| Locus | scaffold409.1 : 231226 ... 234340 : + |
| To GenomeBrowser | scaffold409.1:231226..234340 |
| Genes list of scaffold | scaffold409.1 |
| Synonym | pfu_aug1.0_995.1_65728 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_409.1_30733.t1 | 1 | 1 | SPRY | 63 | 185 | 1.3e-17 | 64.0 | 2.7e-21 | 2.0e-17 | 63.4 |
| pfu_aug2.0_409.1_30733.t1 | 1 | 1 | SOCS_box | 194 | 227 | 3.2e-08 | 33.2 | 7.9e-12 | 5.9e-08 | 32.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_409.1_30733.t1 | gi|676436488|ref|XP_009047899.1| | hypothetical protein LOTGIDRAFT_111900 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_409.1_30733.t1 | gi|291235289|ref|XP_002737573.1| | PREDICTED: SPRY domain-containing SOCS box protein 3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_409.1_30733.t1 | gi|242017263|ref|XP_002429111.1| | SPRY domain-containing SOCS box protein, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_409.1_30733.t1 | gi|157107222|ref|XP_001649680.1| | AAEL014824-PA [Aedes aegypti] | 0.0 |
| pfu_aug2.0_409.1_30733.t1 | gi|91083007|ref|XP_974509.1| | PREDICTED: SPRY domain-containing SOCS box protein 3 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_409.1_30733.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_409.1_30733.t1 atggtgatactgagttggcagcatcaggtattgatccgagatggctgcgaggaaacctggacctggaataaaagggacag atcgcacgaagttcggctaaagggaaatagttcacagacggcgctgttccacccgaactggtccaacgggaccgcggggg tacggggaaacaaacccctgaactatggcagacattactgggaaatcaaagtatcccaaaggatattcgggaccagcatg atgttcggtatcggaaccaggaacgcaagattgcatgttgatgcgttcgtgaatttgataggagaggatggacatagctg ggggttgtcccataaaggactgctgtggcacgacggacaatgggcgcagtacacgaaacctttcagagaaaacgaagcaa caacgatcggcatattgttcgactggtttgaagggacgctatcatatttcaaagacggtgcttgtttgggtgtggcattt tcaggactaaatgagatagaggaagacttgtatcccctcgtgtgctctaccgcagctaagactgagatgaccctgggtgt gcggcggagggggtacctaagcctccaggaccgatgtcgtgcggctatactatccagagtaaaggaggaggacagcattg accatctcccactacccagcaggatgctcagcttcttgaaggacgttcaatga |
|
Protein
| Protein ID | pfu_aug2.0_409.1_30733.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_409.1_30733.t1 MVILSWQHQVLIRDGCEETWTWNKRDRSHEVRLKGNSSQTALFHPNWSNGTAGVRGNKPLNYGRHYWEIKVSQRIFGTSM MFGIGTRNARLHVDAFVNLIGEDGHSWGLSHKGLLWHDGQWAQYTKPFRENEATTIGILFDWFEGTLSYFKDGACLGVAF SGLNEIEEDLYPLVCSTAAKTEMTLGVRRRGYLSLQDRCRAAILSRVKEEDSIDHLPLPSRMLSFLKDVQ |
|