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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_409.1_30736
Locus scaffold409.1 : 289636 ... 295902 : +
To GenomeBrowser scaffold409.1:289636..295902
Genes list of scaffold scaffold409.1
Synonym pfu_aug1.0_995.1_65725

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_409.1_30736.t1 1 1 F5_F8_type_C 92 216 8.4e-12 45.0 1.5e-15 1.1e-11 44.6

Transcript
Transcript IDpfu_aug2.0_409.1_30736.t1
Definition-
>pfu_aug2.0_409.1_30736.t1
atgataagggaaaaatttcctgcggtagagaaacaaatcttgcattccgaaagtcaacgaatcagagttcgacatatcca
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnngcatttggagtatattcacagacacactcctggagtagaaatgctgtggatggtgtctggaatgcagactg
gtatgtaggaggatcctgtatacatacactgaaagagaagaacccatggtggcaggtggacttggagaaggaattcccca
tcagtaaaattttggtgttgaacagggggaaaactgcaactggaagccaagataataacataggtactcgactgaaaaat
atgaaagtgacggtaacaagtgagacgggcaaaacaacagaatttggatttttcaaaggacctggaaaagatgccgaaat
aatagaaatgaagaaagacgtccctgtgaaaggaagatacgtgaaggtacagctgatgacgaccgagtatctaaatatat
gtgaggtcgaagtcattggcaaacagtgttga

Protein
Protein IDpfu_aug2.0_409.1_30736.t1
Definition-
>pfu_aug2.0_409.1_30736.t1
MIREKFPAVEKQILHSESQRIRVRHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXAFGVYSQTHSWSRNAVDGVWNADWYVGGSCIHTLKEKNPWWQVDLEKEFPISKILVLNRGKTATGSQDNNIGTRLKN
MKVTVTSETGKTTEFGFFKGPGKDAEIIEMKKDVPVKGRYVKVQLMTTEYLNICEVEVIGKQC

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