Gene
| Gene Model ID | pfu_aug2.0_409.1_30737 |
|---|---|
| Locus | scaffold409.1 : 301456 ... 316643 : + |
| To GenomeBrowser | scaffold409.1:301456..316643 |
| Genes list of scaffold | scaffold409.1 |
| Synonym | pfu_aug1.0_995.1_65725 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_409.1_30737.t1 | 2 | 1 | F5_F8_type_C | 57 | 111 | 4.5e-17 | 62.0 | 1.8e-09 | 6.6e-06 | 25.9 |
| pfu_aug2.0_409.1_30737.t1 | 2 | 2 | F5_F8_type_C | 253 | 379 | 4.5e-17 | 62.0 | 1.1e-12 | 4.2e-09 | 36.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_409.1_30737.t1 | gi|602672376|ref|XP_007441693.1| | PREDICTED: uncharacterized protein LOC103053962 [Python bivittatus] | 4.0e-28 |
| pfu_aug2.0_409.1_30737.t1 | gi|307344664|ref|NP_001182547.1| | pentraxin precursor [Xenopus (Silurana) tropicalis] | 2.0e-18 |
| pfu_aug2.0_409.1_30737.t1 | gi|585717386|ref|XP_006825692.1| | PREDICTED: uncharacterized protein LOC102801634 [Saccoglossus kowalevskii] | 1.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_409.1_30737.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_409.1_30737.t1 atggaaacaatgtgtgaattaaactttggtataactactcaaaaggacgatcagcatgataagggaaaagttacaacatc ctgcggtagagaaaaaaaccttgcatttcgaaagccaacgaaacaaagttcaacgtttccggcgtttggagtattgtcac agacacactcctggagtagaaatgctgtggatggtgtctggaatgcagactggtatgtaggaggatcctgtatacataca ctgaaagagaagaacccatggtggcaggtggacttggagaaggactaccctatcagtaaaattcttgtcttgaacagagg caaaactgccacgggaaaccatgacagtaacaaaggtgcgcgactgaaaaacatgaatataacagtgataaatgaggcgg gcaaaacaacagaatttggattcttcaagggccctggaacaaatgcccaagaaatagagctgaagaaagatgtgccttcg gttccatggcaacgcaagtcgaacatacgattcttacgtgcattgcacgttacaagtggattgctggtgccaaaaatatc gttcggagatcgtacgacccgcacgtcaaacgttccagtatcttacgatacccttctgaaccatttgctaggcctgcgat cagatattaagcccgccaaggctgccaagacatgcagcacacgtggagaaaagaacctagcatttcgaaagccaacaaat cagagttcaacatatccagcatttggagtatattcacagacacactcctggagtagaaatgctgtggatggtgtcttgaa tgcagactggtatgtaggaggatcctgtatacatacactgaaagagaagaacccatggtggcaggtggacttggagaagg aattccccatcagtaaaattttggtgttgaacagagggaaaactgccaatggaacccaggacgataatagaggtgcgcta ctaaaaaacatgaaagtgacagtaacaagtgaagccggcacagcgacagaatttggatttttcaaaggacctggatctga tgccgaaataatagagctgaacaaggctgtgcctgtaagaggacgatacgtgaaggtacaactgatgacaacagagtatc ttcatatctgcgaggtcgaagtcattggcacacagtgttag |
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Protein
| Protein ID | pfu_aug2.0_409.1_30737.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_409.1_30737.t1 METMCELNFGITTQKDDQHDKGKVTTSCGREKNLAFRKPTKQSSTFPAFGVLSQTHSWSRNAVDGVWNADWYVGGSCIHT LKEKNPWWQVDLEKDYPISKILVLNRGKTATGNHDSNKGARLKNMNITVINEAGKTTEFGFFKGPGTNAQEIELKKDVPS VPWQRKSNIRFLRALHVTSGLLVPKISFGDRTTRTSNVPVSYDTLLNHLLGLRSDIKPAKAAKTCSTRGEKNLAFRKPTN QSSTYPAFGVYSQTHSWSRNAVDGVLNADWYVGGSCIHTLKEKNPWWQVDLEKEFPISKILVLNRGKTANGTQDDNRGAL LKNMKVTVTSEAGTATEFGFFKGPGSDAEIIELNKAVPVRGRYVKVQLMTTEYLHICEVEVIGTQC |
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