Gene
| Gene Model ID | pfu_aug2.0_4121.1_05944 |
|---|---|
| Locus | scaffold4121.1 : 14236 ... 23278 : + |
| To GenomeBrowser | scaffold4121.1:14236..23278 |
| Genes list of scaffold | scaffold4121.1 |
| Synonym | pfu_aug1.0_104290.1_49580 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| phosphoserine phosphatase | GO:0005488 GO:0006563 GO:0016791 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4121.1_05944.t1 | 2 | 1 | Hydrolase | 18 | 31 | 3.2e-09 | 37.5 | 0.079 | 170.0 | 2.4 |
| pfu_aug2.0_4121.1_05944.t1 | 1 | 1 | HAD | 20 | 189 | 1.2e-14 | 54.9 | 8.9e-18 | 1.9e-14 | 54.2 |
| pfu_aug2.0_4121.1_05944.t1 | 1 | 1 | UMPH-1 | 76 | 188 | 9.4e-07 | 28.3 | 6.9e-10 | 1.5e-06 | 27.7 |
| pfu_aug2.0_4121.1_05944.t1 | 2 | 2 | Hydrolase | 93 | 190 | 3.2e-09 | 37.5 | 4.7e-11 | 1.0e-07 | 32.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4121.1_05944.t1 | gi|148232706|ref|NP_001086494.1| | phosphoserine phosphatase [Xenopus laevis] | 0.0 |
| pfu_aug2.0_4121.1_05944.t1 | gi|213514080|ref|NP_001135130.1| | Phosphoserine phosphatase [Salmo salar] | 0.0 |
| pfu_aug2.0_4121.1_05944.t1 | gi|284413682|ref|NP_001016993.2| | phosphoserine phosphatase [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_4121.1_05944.t1 | gi|742081884|ref|XP_010902773.1| | PREDICTED: phosphoserine phosphatase isoform X2 [Esox lucius] | 0.0 |
| pfu_aug2.0_4121.1_05944.t1 | gi|742081880|ref|XP_010902696.1| | PREDICTED: phosphoserine phosphatase isoform X1 [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4121.1_05944.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4121.1_05944.t1 atggcaggaagtaaaacactggaggaggtaaaagctgtgtggaagaaagcggatgctgtttgttttgatgtggattccac agtgatgcaagacgaagccctggatgaattagccaagttttgtggagttggaaaggaggtacaagaatggaccaataaag ctatgggaggtggtgtcacattccgagtagctctgacagagagattgaatatagtgcagccttcacatcagaatctaaag gactttatttcctgccacaaattgtgttttacacttggaataaaagaactggtatctgcattacagcaaagaaatgtatc agtgtttctagtgtctggtggattccagagtatcatagagcctgcagcaaaacaacttaacattcctaagcaaaacatat atgcaaacagactcaaattctactacaatggtcagtatgctggttttgatgagaatcaacctacatcgtcatctggtgga aagacagaggttgccaagttactgaaagagaagcatggttttcagaatctcatatttattggtgatggtataactgacat ggaagcctgtccaccagctgatgcatttattggatttggcgggaatgttgagagaagttcggtcagggaaaattcagctt ggtttgttaaacatttcaaagaactgctaacagagcttgatattgactcatga |
|
Protein
| Protein ID | pfu_aug2.0_4121.1_05944.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4121.1_05944.t1 MAGSKTLEEVKAVWKKADAVCFDVDSTVMQDEALDELAKFCGVGKEVQEWTNKAMGGGVTFRVALTERLNIVQPSHQNLK DFISCHKLCFTLGIKELVSALQQRNVSVFLVSGGFQSIIEPAAKQLNIPKQNIYANRLKFYYNGQYAGFDENQPTSSSGG KTEVAKLLKEKHGFQNLIFIGDGITDMEACPPADAFIGFGGNVERSSVRENSAWFVKHFKELLTELDIDS |
|