Gene
| Gene Model ID | pfu_aug2.0_4124.1_15927 |
|---|---|
| Locus | scaffold4124.1 : 26825 ... 47474 : - |
| To GenomeBrowser | scaffold4124.1:26825..47474 |
| Genes list of scaffold | scaffold4124.1 |
| Synonym | pfu_aug1.0_4097.1_16287 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| procollagen- -oxoglutarate 5-dioxygenase 3 | GO:0001755 GO:0008045 GO:0016706 GO:0043167 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4124.1_15927.t1 | 2 | 1 | Anp1 | 71 | 127 | 4.6e-06 | 25.9 | 0.00022 | 1.1 | 8.3 |
| pfu_aug2.0_4124.1_15927.t1 | 2 | 2 | Anp1 | 144 | 200 | 4.6e-06 | 25.9 | 1.6e-06 | 0.0077 | 15.4 |
| pfu_aug2.0_4124.1_15927.t1 | 1 | 1 | 2OG-FeII_Oxy | 424 | 510 | 2.2e-09 | 37.5 | 1.3e-12 | 6.5e-09 | 35.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4124.1_15927.t1 | gi|524876286|ref|XP_005094861.1| | PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_4124.1_15927.t1 | gi|676454182|ref|XP_009053597.1| | hypothetical protein LOTGIDRAFT_188441 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4124.1_15927.t1 | gi|242016159|ref|XP_002428703.1| | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 precursor, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_4124.1_15927.t1 | gi|688612988|ref|XP_005162484.2| | PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 isoform X1 [Danio rerio] | 0.0 |
| pfu_aug2.0_4124.1_15927.t1 | gi|655892635|ref|XP_008248938.1| | PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 1-like [Oryctolagus cuniculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4124.1_15927.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4124.1_15927.t1 ctgatgtaactataaagtacaaaagtgaccacagctacctgtataacttcaaaacagggaccacacccattgttatccat ggaaacggaccaatcaagccagagtttaaccgcatcgctaactacctagtggatggttggacgaccagtagcggttgtct gtcctgtaagagagatatcatcagtttggaggggatgaaagatgacgaccttcccacaattctactcgctctatttatag aattccctacaccttttattgaggagtacctagagagagtctcaaaacttaactatccaaagagtcgcatggatttgttt attcacaataaggaagattaccatagtaaagatgtagcggcttttctggagaagtataatgatgaatacaggtctaccac agttctctcccctagtgacgggctatctgaagccaatgcaaggacatgggctatagaggagggtacaaagaaattatccc agtatttcttcaacgtagattctaacattcaaattgaggacccaaacacactgagggatctgatagaacagaataggact ataatagctccgataacggtgagaccgtacaagctgtggtccaatttctggggagccgtgactaagacaggatggtacgc cagatcggaggactacatgaacatcgtagaatataaactcaaaggcttgtggaatgtaccctatattagtggtatatact taatccagggatcactgatgccgtcactaagtcgagtttattactatcatcatatggatgctgacatgtcctttgctact aatgtcaggaagatgggaatttttatgtttgccacaaatatgaagaagtttggacatttggtggacgtagaaaactttga tacttcccatctgcacaatgatatgtatcagattttccagaatccgtgggattgggaagagaaatacattcatgaagatt acagtaaaagtttacaagaagacactgtcatagatcagccatgtcaagatgtttattggtttccgattgtgtcggacgta ttctgtaaacagctaatcgaggaaatggagaaactaaaccaatggtcaggtggcagacacgaggaccctagattatcagg aggttacgaaaacgtacccactgtagatacccacatgaagcaaataggcatggaagacgaatggcttcaattcctcaaaa attacgttaggcctctgcaagaaaaagtatttattggatattatcataatccacctcgagccattatgaattttgtggtg aggtaccgccctaatgagcaggataggctccgcccacatcacgattcatccacgttcacgataaacatcgctcttaatac accaggcattgattttgagggaggaggatgtagatttatacgatacaactgcagcgtcacggcaactcgacggggctgga tgctgatgcatcctgggagattgactcactatcatgagggtttggtcgtcacaaagggaactcgctatatcatgatctca tttattgacccttag |
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Protein
| Protein ID | pfu_aug2.0_4124.1_15927.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4124.1_15927.t1 DVTIKYKSDHSYLYNFKTGTTPIVIHGNGPIKPEFNRIANYLVDGWTTSSGCLSCKRDIISLEGMKDDDLPTILLALFIE FPTPFIEEYLERVSKLNYPKSRMDLFIHNKEDYHSKDVAAFLEKYNDEYRSTTVLSPSDGLSEANARTWAIEEGTKKLSQ YFFNVDSNIQIEDPNTLRDLIEQNRTIIAPITVRPYKLWSNFWGAVTKTGWYARSEDYMNIVEYKLKGLWNVPYISGIYL IQGSLMPSLSRVYYYHHMDADMSFATNVRKMGIFMFATNMKKFGHLVDVENFDTSHLHNDMYQIFQNPWDWEEKYIHEDY SKSLQEDTVIDQPCQDVYWFPIVSDVFCKQLIEEMEKLNQWSGGRHEDPRLSGGYENVPTVDTHMKQIGMEDEWLQFLKN YVRPLQEKVFIGYYHNPPRAIMNFVVRYRPNEQDRLRPHHDSSTFTINIALNTPGIDFEGGGCRFIRYNCSVTATRRGWM LMHPGRLTHYHEGLVVTKGTRYIMISFIDP |
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