Gene
| Gene Model ID | pfu_aug2.0_4129.1_32622 |
|---|---|
| Locus | scaffold4129.1 : 1 ... 12252 : + |
| To GenomeBrowser | scaffold4129.1:1..12252 |
| Genes list of scaffold | scaffold4129.1 |
| Synonym | pfu_aug1.0_8700.1_53218 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4129.1_32622.t1 | 1 | 1 | Hist_deacetyl | 2 | 199 | 0.0 | 178.0 | 0.0 | 0.0 | 164.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4129.1_32622.t1 | gi|701424384|ref|XP_010001733.1| | PREDICTED: histone deacetylase 8 [Chaetura pelagica] | 0.0 |
| pfu_aug2.0_4129.1_32622.t1 | gi|701298349|ref|XP_010009509.1| | PREDICTED: histone deacetylase 8, partial [Nestor notabilis] | 0.0 |
| pfu_aug2.0_4129.1_32622.t1 | gi|704295081|ref|XP_010161027.1| | PREDICTED: histone deacetylase 8, partial [Caprimulgus carolinensis] | 0.0 |
| pfu_aug2.0_4129.1_32622.t1 | gi|529434103|ref|XP_005236833.1| | PREDICTED: histone deacetylase 8 [Falco peregrinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4129.1_32622.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4129.1_32622.t1 cttatgattgtcctgttcacgagggtctgtatgagtatggttcactgacagggggagcaactcttacagcggcagaatgt ttgcttcgaggagagtgtctgactgcaatcaactggtgcgggggatggcatcatgcgaaaaaagatcaagcttcagggtt ttgctatgtaaatgacattgtattgggaatattgaggctgagagagaaatttgataaagttctgtacgtggatttagatg ttcatcatggtgatggagtagaggaggctttttgtgcatcaaccaaagtcctgacattgtctgtacacaagaaggctgca ggattctatccaggtacaggtgaccttttagatgtgggagtaggaaaagccaaaattttacagaaagtgaaggatgtttt tatacctgatgctgttgtatgtcagtgtggggcagatggacttgctggggatcctatggactccttcaaccttacacacc tagcactggccaaaccactgtactttatcactaattggaagataccaacacttatcttagggggaggaggctataatttc atcaatactgcaaaatgttggacttatctaaccagtgtggctactagaaggaaaatttcaatggatattcccgatcataa gggaagctga |
|
Protein
| Protein ID | pfu_aug2.0_4129.1_32622.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4129.1_32622.t1 YDCPVHEGLYEYGSLTGGATLTAAECLLRGECLTAINWCGGWHHAKKDQASGFCYVNDIVLGILRLREKFDKVLYVDLDV HHGDGVEEAFCASTKVLTLSVHKKAAGFYPGTGDLLDVGVGKAKILQKVKDVFIPDAVVCQCGADGLAGDPMDSFNLTHL ALAKPLYFITNWKIPTLILGGGGYNFINTAKCWTYLTSVATRRKISMDIPDHKGS |
|