Gene
| Gene Model ID | pfu_aug2.0_4153.1_12597 |
|---|---|
| Locus | scaffold4153.1 : 3256 ... 15517 : + |
| To GenomeBrowser | scaffold4153.1:3256..15517 |
| Genes list of scaffold | scaffold4153.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4153.1_12597.t1 | 1 | 1 | DUF4061 | 47 | 135 | 2.5e-31 | 107.6 | 5.2e-35 | 3.8e-31 | 107.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4153.1_12597.t1 | gi|676475180|ref|XP_009060389.1| | hypothetical protein LOTGIDRAFT_229217 [Lottia gigantea] | 6.0e-39 |
| pfu_aug2.0_4153.1_12597.t1 | gi|524864124|ref|XP_005088900.1| | PREDICTED: coiled-coil domain-containing protein 28A-like isoform X3 [Aplysia californica] | 2.0e-35 |
| pfu_aug2.0_4153.1_12597.t1 | gi|524864120|ref|XP_005088898.1| | PREDICTED: coiled-coil domain-containing protein 28A-like isoform X1 [Aplysia californica] | 6.0e-30 |
| pfu_aug2.0_4153.1_12597.t1 | gi|524864126|ref|XP_005088901.1| | PREDICTED: coiled-coil domain-containing protein 28A-like isoform X4 [Aplysia californica] | 1.0e-29 |
| pfu_aug2.0_4153.1_12597.t1 | gi|260782376|ref|XP_002586264.1| | hypothetical protein BRAFLDRAFT_109350 [Branchiostoma floridae] | 2.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_4153.1_12597.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4153.1_12597.t1 atggcaagcgaacagccaagtagaaagggagataactttccattaagtatccaggctcaagaaaaaaacgtaaagaaatc tggtagtacctcagacagcaagttaaggcccggtaaggagcattcttttctgactgacgtagcggacgtacgagccatgg aacatgggctattacaactattagctgacttccattcaggaaaactccaggcttttggaggaaacatgacgtttgagaaa atggaccagattagagaacaacaggaacatctagccaaacttcacttcgagatggacatgcaacaagacatgcaaaggcg tgacacagaggccagtagggtgacttctaatgagaaattagtcaggctgatggacaagctccattccattagttcttcca tacaaagtttgcagaatcaggacagccatcagtaa |
|
Protein
| Protein ID | pfu_aug2.0_4153.1_12597.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4153.1_12597.t1 MASEQPSRKGDNFPLSIQAQEKNVKKSGSTSDSKLRPGKEHSFLTDVADVRAMEHGLLQLLADFHSGKLQAFGGNMTFEK MDQIREQQEHLAKLHFEMDMQQDMQRRDTEASRVTSNEKLVRLMDKLHSISSSIQSLQNQDSHQ |
|