Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_4153.1_12598
Locus scaffold4153.1 : 15771 ... 46742 : -
To GenomeBrowser scaffold4153.1:15771..46742
Genes list of scaffold scaffold4153.1
Synonym pfu_aug1.0_6001.1_38252

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_4153.1_12598.t1 gi|676490359|ref|XP_009065243.1| hypothetical protein LOTGIDRAFT_211073 [Lottia gigantea] 0.0
pfu_aug2.0_4153.1_12598.t1 gi|524905827|ref|XP_005108274.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14-like [Aplysia californica] 0.0
pfu_aug2.0_4153.1_12598.t1 gi|383858134|ref|XP_003704557.1| PREDICTED: mediator of RNA polymerase II transcription subunit 14 [Megachile rotundata] 0.0
pfu_aug2.0_4153.1_12598.t1 gi|383858136|ref|XP_003704558.1| 0.0

Transcript
Transcript IDpfu_aug2.0_4153.1_12598.t1
Definition-
>pfu_aug2.0_4153.1_12598.t1
aacttccagaaataaatgattttgaagaagcattgaacggtgacaggaggggattggagggtcatataaacaacattaag
atccagatgtgtatgttacggtgtgagaaatcgacacagtatctgccgacttcctgccagcgacaactgccaattgtaaa
catggccggacatcccgtcgagaaattgagcccacatacgctcttcatcagggtccccaagcaggccaattatttcttga
ttctactaggtgaatatgacggtccaaagaacaagaagaacaagggcaatgcctacttcataccagacctagcctatata
cttgccagctgtgaggagaggatacagttcgttaatttaggagtagagttggagaaaaatggtgtagtgcactccggtat
ccatgcagatagtgagggaacatgcttctgtttgtcgattgctagtttgccagatgtggatggtttagacaagaaaatct
gtgaaaagatcaagaagctcctactgtccctgaagttacgtattctcagccgaccgacccgtaactggatagtggagttt
gtatttgccaaatcaccacttcaaagtgccacaaaaaaggagcagggttcggtcatcagggttcattacatgtttgaatt
gaacatagacaatctaaagaaggttgtgaaggacatactggatgaatggtcgagtatctgtcacctttacagcctggtgg
acgaattcgcagttatttataatgattccaggacaagtttacataacacggcagacatacagtcgtatgattacaggagg
ctaacactgtactatggacctaataggaatagtgtggccattcttcaatggaagggtgatgcaaaacagttcaccttgac
cttaggatcagtaggtcagacaacgaccttgaaccctcatattccagtggttgtgcagctccagcaggaattgaatgctt
ctaggtcactcgctcagctggcacaaactttatacgacacttggtcaccaatgacgtccatcaacaagctatccacttct
ctggtacaggctgccaacaccactttatacgacacttggtcaccaatgacgtccatcaacaagctatccacttctctggt
acaggctgccaacaccactatcaaagaaactacccagagtttcaccatcatcccacagtcaactactcacgttaggatag
ctttcagatacaggttttgtgtagatatccatttccgtggtaataagatcgtagcggtgagggacggagcatacagcttg
tttgacaacagtaaagtggtagatagttttacacctactcccatgcttaaggcatttttgaacatgtatgtggatgattc
catcactggtcgtcacacccatcgtatgtcagcgacggaggacgacaaccccccttcccccgttctgatggactcggtag
acgtgtttaacatgtcacagccaccttctatgggatcacctgtatcccgtcgtcaggatgccagtattaggttctctagt
cctatgactccgccttcaaacccccacacacctgcctcgccaagtacagtcagaatgtcaggggtgaccccatcaccatc
cacagctttgattggtacaccctccccaggtaacctcctaggggcggggtcaccaggaaacccacaacttcatgtaccct
cccctggatcatttgtccccgccccttctcctcagtccctagggatacatatgccttcacctgccggaggattcatggga
ccatcaggtatagatgcaggctcgccattcacaagttctggcttagctatgccttctcctggtcagagaaactggcctaa
ttccccgtctgtgccaggtccttctcctgcatccaggcacgcggcacactccccagggcaccctgcccttcactccccac
agacacaggccaaggatggagaccatagcaaaacatcaggtataagtcacccatccaggatgcttccccagaggtcttgg
gcagcctctattcctaccctcctctcccacgaatctctagatacactcctgacccctaacaaacttccgagtgtgaccca
tgccatcctgctgtcaccactggagagattcctgggatgtgttttcctacgtagaaatctcatacgactcattcatacgg
aatctcttacagccctgcagtcatcagatccctatatgaccttgtttaaagccgagacgctccagttccgagtctccttc
aacaccagtaacttccagagtttacatatgaatgttactccactacctgaacatagcgccatatggactaccgaagtgct
gaatattgtagagcagtactttgatcaaaaggttgcctgcccgccatacaaagtgaacgccctgagagcctttcttagga
ttctagacacaccccctagagttcttaaagactgtatacaactaatgaggttggaactgaccccacaggcagtccttgac
ccgcgggcccagatgaagtggtccatgcagctctgtttaaccttaccaccagtgtgggcctacatggcctctgcagggaa
cgcagccgtggccaagggaaaacaacaaaaaatactgatgatggtaggggactctgatagagtaacacctaatcttaaag
tcagagatgttgtttccctctttggcagatacattcgattttatatacgtgaagaacaaaatgatgaatcagatgaaaat
ggaaactttcaagtagaagaccccaatgtcaacaatgcaaaaactaatgcatttaccatattgatgaattcatcgacaaa
gatgtctcttcccccagcattaagcgaagatgggaaaatagccaacaacaaacgaacactgtataacaaggtactcaata
tattgcagagagcggagcttggttttaccccgtcaaatttccaatctggtcaacatatgattcaatcggtaacaaatgca
ttatggtacattgacccttttacggacagattcaatgagcgtggattgtaccatcctttactatttgaacatctggttgg
gttcaatgatccaggcaaacataaacacaagaaacagagaattgatagttccagtttacagggacatgcccaggatttgg
acttggtattggatcaaacatggatagatgggttaacatggactccaattaaaaaatctattcaagaattatctcaaatg
ctacacaaattcattgaatatctcaaaaagaacaatgataagatgaaaagtaaccactcacaatcagttcctttgagatc
tgtagaagatacacagtctatcaagattatcgctcctaagtatgtggttagaccaacattgtcaagtagatatagagccc
taacatctcatctagatgctctgaatccttacgagcccatttgtgttgatgaatataccccagctgacagatacaaaagg
aggtactatattgacaatttgaattgttcattatctcataaatgtattctttatcgtgtatcagcaggcaaccatcttgg
aacacacaattttctgtggaaaattccaacaaaccattctgaagaggaaaggtgcacaaaaaaccaagaggtaattcagg
caatatcaaaggatataccaaagtaccatactagggctatgcgtcgagcattcattcaacaaacagcactgatttgttcc
atgaagcctatgcatgctcgaaatatttacaaaacacttacaagtgacagttctgcttctgaaaatatgtgtgaaaaaca
ggttgatgaaagagtttcacaggcattcttgcttcaggatccagacattgtgcaagaccttcgtgaacataaccagggta
gacctccaaagtacagtgtttttttcgaaaaaactaaagaatacattgagtctgtcgttgaaactgctgttgatgataga
cgacatgacaaattcacatatttagccacagctatatctgttcccgatttgaaacgtcaagttagtgctgtttgtccgcc
aaatactccaattccgagtgaacaatggataaggttccagtttgccccaaagaatgctactacacaggcctcatcacaat
acactggtaaactgaatgtaaagttccaagtacaaagcaggcaactgcgtaaagacaatgttgacatgcattatgcatcg
gcaatttttcactatttaaaagaatttgcagtacgtttccgtgagaatacatctttcatttgtatggatgataagcacca
ttgtaaagtgggagagccaggtcatcctgtggctgctgtggagagaggaaggagagttatagttggacaagatagagtgt
ttgctgtgtcagaccatgactttacaaaatttagcattataccaagcgttactatgatgattgatataccagattccgtg
tttggctctttttatagagggcaagtgtatgttggagtaaaggacttgattttagagccttcttcaccactgcgacacat
tactgagctgtctgacattttggaaaaagaaaacaatggcaagcctattttgatcatctacatggatggtggccctgacc
atcgcttgacttatttgtcagttcagctttgccttctatgtttattcttacaaggcaactatgacatgcttatcgctgca
cgaactccacccatgaattcttggaagaaccctccagagaggatcatgtctatcctgaatttagctctacagagtgttgg
acttatgcgttcacagcaatcagatgaatttgagaagaagctgaatagtctgtctgggattggtcagctgagggaatatg
caggtctgtcggatgacaataaatcacaaatgatggataccattgaacctgttaaggtccttctgacaaaaatgtttgaa
agactacagctgaaagataaaggatttaagacatttcccccggcaccagaacaaaatatgcaaaacatgtggaagaacct
ggacatgtatggggaacctcctgaatacagcagaatgaggcaagctgatctgatgaaaagtttgaaggacaggccagagc
tgaaggctgtcattaaccactgcacagtgtccagatcatactttttttccattaaaaaatgtggagaaactgactgtaaa
atctgcaggaagccagtcttgccccctgatgtctttgagaatttgcatcattttccagatccaataccaggagaggatga
tcattacatgagctttgatgacctatatggaacccagaccacagaggagcaccggccttctttgaaatccaagcagagtg
tcagcccaggtcaccagattccattttcacccagtgctcaaacaacaaaaacagtcaaatgtgcacttgtgtgtacagaa
tgcgaaaaaccaagagttgtttattctgcaaaaactctatcgccaaaggatgcacaattgcttcttaggataaaacaact
gtttcactattcatgtgggtcacaactccaagagctgaagacagctgataatagcacaccacagatcaatgctttgctag
aaaaatgctatgttcgggccaacctgtcatgtgaaatggccattgaagttccatatttcagttctggatgctttccagat
atatgttattattgtggtgaatctgacgaaaatgtccttctcagggaggagggagcctatccaatttgttccaattctcc
agttgacccggatatcctcccagcttccaccggggacagagcctcagacaattatcgtacccctattatacgatatgaac
aacaatactatacaacaagcggatctcatcagaggtcaacaaactacgcctacgtatgtggccgtatctcagatgttaaa
acgctactcggacttccatcagtcgtcttcggactgtatcttgttctcagctatgttggcgtgagggggtccaaggagca
ggaggaaaccagagtacccagagaaaaaaaccctgcagaggcctgggtgggggaccacgcaccctcccacataagaccct
ttgccgaatccgagattcgatcccgggaccttagaagtgagaatcttggaaaggctcttgttatagtactgtag

Protein
Protein IDpfu_aug2.0_4153.1_12598.t1
Definition-
>pfu_aug2.0_4153.1_12598.t1
LPEINDFEEALNGDRRGLEGHINNIKIQMCMLRCEKSTQYLPTSCQRQLPIVNMAGHPVEKLSPHTLFIRVPKQANYFLI
LLGEYDGPKNKKNKGNAYFIPDLAYILASCEERIQFVNLGVELEKNGVVHSGIHADSEGTCFCLSIASLPDVDGLDKKIC
EKIKKLLLSLKLRILSRPTRNWIVEFVFAKSPLQSATKKEQGSVIRVHYMFELNIDNLKKVVKDILDEWSSICHLYSLVD
EFAVIYNDSRTSLHNTADIQSYDYRRLTLYYGPNRNSVAILQWKGDAKQFTLTLGSVGQTTTLNPHIPVVVQLQQELNAS
RSLAQLAQTLYDTWSPMTSINKLSTSLVQAANTTLYDTWSPMTSINKLSTSLVQAANTTIKETTQSFTIIPQSTTHVRIA
FRYRFCVDIHFRGNKIVAVRDGAYSLFDNSKVVDSFTPTPMLKAFLNMYVDDSITGRHTHRMSATEDDNPPSPVLMDSVD
VFNMSQPPSMGSPVSRRQDASIRFSSPMTPPSNPHTPASPSTVRMSGVTPSPSTALIGTPSPGNLLGAGSPGNPQLHVPS
PGSFVPAPSPQSLGIHMPSPAGGFMGPSGIDAGSPFTSSGLAMPSPGQRNWPNSPSVPGPSPASRHAAHSPGHPALHSPQ
TQAKDGDHSKTSGISHPSRMLPQRSWAASIPTLLSHESLDTLLTPNKLPSVTHAILLSPLERFLGCVFLRRNLIRLIHTE
SLTALQSSDPYMTLFKAETLQFRVSFNTSNFQSLHMNVTPLPEHSAIWTTEVLNIVEQYFDQKVACPPYKVNALRAFLRI
LDTPPRVLKDCIQLMRLELTPQAVLDPRAQMKWSMQLCLTLPPVWAYMASAGNAAVAKGKQQKILMMVGDSDRVTPNLKV
RDVVSLFGRYIRFYIREEQNDESDENGNFQVEDPNVNNAKTNAFTILMNSSTKMSLPPALSEDGKIANNKRTLYNKVLNI
LQRAELGFTPSNFQSGQHMIQSVTNALWYIDPFTDRFNERGLYHPLLFEHLVGFNDPGKHKHKKQRIDSSSLQGHAQDLD
LVLDQTWIDGLTWTPIKKSIQELSQMLHKFIEYLKKNNDKMKSNHSQSVPLRSVEDTQSIKIIAPKYVVRPTLSSRYRAL
TSHLDALNPYEPICVDEYTPADRYKRRYYIDNLNCSLSHKCILYRVSAGNHLGTHNFLWKIPTNHSEEERCTKNQEVIQA
ISKDIPKYHTRAMRRAFIQQTALICSMKPMHARNIYKTLTSDSSASENMCEKQVDERVSQAFLLQDPDIVQDLREHNQGR
PPKYSVFFEKTKEYIESVVETAVDDRRHDKFTYLATAISVPDLKRQVSAVCPPNTPIPSEQWIRFQFAPKNATTQASSQY
TGKLNVKFQVQSRQLRKDNVDMHYASAIFHYLKEFAVRFRENTSFICMDDKHHCKVGEPGHPVAAVERGRRVIVGQDRVF
AVSDHDFTKFSIIPSVTMMIDIPDSVFGSFYRGQVYVGVKDLILEPSSPLRHITELSDILEKENNGKPILIIYMDGGPDH
RLTYLSVQLCLLCLFLQGNYDMLIAARTPPMNSWKNPPERIMSILNLALQSVGLMRSQQSDEFEKKLNSLSGIGQLREYA
GLSDDNKSQMMDTIEPVKVLLTKMFERLQLKDKGFKTFPPAPEQNMQNMWKNLDMYGEPPEYSRMRQADLMKSLKDRPEL
KAVINHCTVSRSYFFSIKKCGETDCKICRKPVLPPDVFENLHHFPDPIPGEDDHYMSFDDLYGTQTTEEHRPSLKSKQSV
SPGHQIPFSPSAQTTKTVKCALVCTECEKPRVVYSAKTLSPKDAQLLLRIKQLFHYSCGSQLQELKTADNSTPQINALLE
KCYVRANLSCEMAIEVPYFSSGCFPDICYYCGESDENVLLREEGAYPICSNSPVDPDILPASTGDRASDNYRTPIIRYEQ
QYYTTSGSHQRSTNYAYVCGRISDVKTLLGLPSVVFGLYLVLSYVGVRGSKEQEETRVPREKNPAEAWVGDHAPSHIRPF
AESEIRSRDLRSENLGKALVIVL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495