Gene
| Gene Model ID | pfu_aug2.0_416.1_20742 |
|---|---|
| Locus | scaffold416.1 : 26036 ... 40936 : + |
| To GenomeBrowser | scaffold416.1:26036..40936 |
| Genes list of scaffold | scaffold416.1 |
| Synonym | pfu_aug1.0_21682.1_18812 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_416.1_20742.t1 | 1 | 1 | PX | 11 | 89 | 5.9e-17 | 61.4 | 6.5e-21 | 9.6e-17 | 60.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_416.1_20742.t1 | gi|700383828|ref|XP_009931873.1| | PREDICTED: sorting nexin-11 [Opisthocomus hoazin] | 7.0e-17 |
| pfu_aug2.0_416.1_20742.t1 | gi|733922990|ref|XP_010722880.1| | PREDICTED: sorting nexin-11 [Meleagris gallopavo] | 1.0e-16 |
| pfu_aug2.0_416.1_20742.t1 | gi|597792322|ref|XP_007259161.1| | PREDICTED: sorting nexin-11-like isoform X1 [Astyanax mexicanus] | 1.0e-16 |
| pfu_aug2.0_416.1_20742.t1 | gi|597792331|ref|XP_007259164.1| | PREDICTED: sorting nexin-11-like isoform X4 [Astyanax mexicanus] | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_416.1_20742.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_416.1_20742.t1 atgagtcagacttccaacaaatccttttgcctagaatgttccagtgtgaggaggcgtttctcagaatttgattggttaag cagagtattgaaatctcatcatcctgatttgagtccaccctcccttcctcccaaaaagttctttaaaggcaggtttgaca aggacttcatcatcttcaggatgaaaggtcttgaggagtacctaaacaaggttatagaagagaagtattacctgtcagat gtatgtctccacctgctcctacagacagacctaacaaccaatgaaattgatgatttcttacaaggaaaaatgccgtctca catcatagatgaagtctggaaaaatggtggaatcaagggacagtgcagtaatttcaaacagagtcagtctgaagagagtg aaattagtgtgcagggaaagataactcctaaagatgatcaaggatcagacgattcggaattcacggcaagtacaatgtcc agttacgatgacgtgccgcaaactgaccagtatgacagtcacagtgacagtatgtctggtttctctaagagtgatgaacc gtatgaaaatgccaaagaaatgaaacacatggccagttttgatcctgaaggaaactgtgatgtatctttaccagtaagca ttaatggaacatacacaaagaaaacctga |
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Protein
| Protein ID | pfu_aug2.0_416.1_20742.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_416.1_20742.t1 MSQTSNKSFCLECSSVRRRFSEFDWLSRVLKSHHPDLSPPSLPPKKFFKGRFDKDFIIFRMKGLEEYLNKVIEEKYYLSD VCLHLLLQTDLTTNEIDDFLQGKMPSHIIDEVWKNGGIKGQCSNFKQSQSEESEISVQGKITPKDDQGSDDSEFTASTMS SYDDVPQTDQYDSHSDSMSGFSKSDEPYENAKEMKHMASFDPEGNCDVSLPVSINGTYTKKT |
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