Gene
| Gene Model ID | pfu_aug2.0_416.1_20747 |
|---|---|
| Locus | scaffold416.1 : 241498 ... 249445 : - |
| To GenomeBrowser | scaffold416.1:241498..249445 |
| Genes list of scaffold | scaffold416.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vesicular glutamate transporter 1 | GO:0006811 GO:0044464 GO:0044763 GO:0045202 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_416.1_20747.t1 | 2 | 1 | MFS_1 | 20 | 398 | 1.49939e-43 | 148.9 | 1.4013e-45 | 1.29998e-41 | 142.5 |
| pfu_aug2.0_416.1_20747.t1 | 2 | 2 | MFS_1 | 388 | 450 | 1.49939e-43 | 148.9 | 0.00011 | 0.8 | 8.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_416.1_20747.t1 | gi|147899918|ref|NP_001085081.1| | vesicular glutamate transporter 1 [Xenopus laevis] | 0.0 |
| pfu_aug2.0_416.1_20747.t1 | gi|556980011|ref|XP_005996777.1| | PREDICTED: vesicular glutamate transporter 1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_416.1_20747.t1 | gi|751200621|ref|XP_011163195.1| | PREDICTED: vesicular glutamate transporter 1 [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_416.1_20747.t1 | gi|657580524|ref|XP_008294230.1| | PREDICTED: vesicular glutamate transporter 3 [Stegastes partitus] | 0.0 |
| pfu_aug2.0_416.1_20747.t1 | gi|158297203|ref|XP_317474.4| | AGAP007992-PA [Anopheles gambiae str. PEST] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_416.1_20747.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_416.1_20747.t1 atgtgccttccaaagcgttacatcgttgtcttactggggttttgggggttgttgatttcgatcgggtaccgtgctgtatt tgccatggtgatggtacacgtgatcaaagcctcccatgggacagataatgatgaatctctttttgctggtaattgcactg cgtacggacatggaagaaatctaacattagagtggagtgttgccatttcgcagtactttaacaccgggtattttcttggg tcggtaataacacaacttccaggaggatatctggcgtccaggttctcaccacgcagagtgtgtggtttctcgatattgat aagcagtgtaatgatggtatgtctacctgaggccattaaattcagcaaatacctggtgttcgttctgaggtgtttacaag gaatcgttgagggttgttcagtgccagccctaaatggagttatttctgcatgggctccgaaatacgagcgaagcaaaatg ataacctttgcttttgcaggagcctatctgagtccagcggttggtcagattgtgactggcttcacagcatgtttcttagc gtggtacgctagcctttatatatacggaggactaggcattatctggtctttattgtggatattttgtttgtatgacacac ccagtcagcacccatctctgagtagagcagagagagatctttttgaacgggaaggggcttcagtcaaacaaggatcagcc aaagtggcatcacagataccatggagaaagatccttacatctctaccaatgtcagccatcatgataggaagtttctgtcg taactggatatttgccatggtcattaccgaagtccctcaatacttcaaagatgcatttaaaatggatatagcaacgattg gtttgaaggcagctttacctgagatacttatgacagtggtgacaatcactggtggtgttaccattgataaactcattaaa agtcgactaatcagcacaactgtgggcagaaaactggctcaaacaacaggttttggtattgaggcattatgttttctttc actgagatggatatataatagcaccaatgccttagtgttactgtcagtgggtgtagcttttagtggatttgctatatctg gataccaagtgaatccccttgaccttgccccacagtatgccagtgtactgacagggatgtccaggcttggtgccataggt gctgtacttagcacttttgtggctggcaagctcggaaaacagaatattgaatcatggcaagaaattttcaccattgctgg atccatacatctggtaggggtagcatattatgcaatatttgcctctgggcagttacaagattgggctgttgttgaggaaa caaaacctttagttagttctgtacgtgaaagttcaccaccagaaaatgccaaagacaatgaggaccaagtggaatcaatt gaagatagagacttcagatatagtgcatcacaaagagctcataacaaggaagaatatgactctcctgactggtttactac ttcatatccatga |
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Protein
| Protein ID | pfu_aug2.0_416.1_20747.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_416.1_20747.t1 MCLPKRYIVVLLGFWGLLISIGYRAVFAMVMVHVIKASHGTDNDESLFAGNCTAYGHGRNLTLEWSVAISQYFNTGYFLG SVITQLPGGYLASRFSPRRVCGFSILISSVMMVCLPEAIKFSKYLVFVLRCLQGIVEGCSVPALNGVISAWAPKYERSKM ITFAFAGAYLSPAVGQIVTGFTACFLAWYASLYIYGGLGIIWSLLWIFCLYDTPSQHPSLSRAERDLFEREGASVKQGSA KVASQIPWRKILTSLPMSAIMIGSFCRNWIFAMVITEVPQYFKDAFKMDIATIGLKAALPEILMTVVTITGGVTIDKLIK SRLISTTVGRKLAQTTGFGIEALCFLSLRWIYNSTNALVLLSVGVAFSGFAISGYQVNPLDLAPQYASVLTGMSRLGAIG AVLSTFVAGKLGKQNIESWQEIFTIAGSIHLVGVAYYAIFASGQLQDWAVVEETKPLVSSVRESSPPENAKDNEDQVESI EDRDFRYSASQRAHNKEEYDSPDWFTTSYP |
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