Gene
| Gene Model ID | pfu_aug2.0_42.1_06804 |
|---|---|
| Locus | scaffold42.1 : 8746 ... 43022 : + |
| To GenomeBrowser | scaffold42.1:8746..43022 |
| Genes list of scaffold | scaffold42.1 |
| Synonym | pfu_aug1.0_6740.1_31272 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_42.1_06804.t1 | 3 | 1 | fn3 | 2 | 115 | 2.0e-19 | 69.5 | 3.3e-10 | 3.8e-07 | 30.1 |
| pfu_aug2.0_42.1_06804.t1 | 3 | 2 | fn3 | 168 | 249 | 2.0e-19 | 69.5 | 4.6e-05 | 0.052 | 13.6 |
| pfu_aug2.0_42.1_06804.t1 | 3 | 3 | fn3 | 276 | 352 | 2.0e-19 | 69.5 | 5.5e-09 | 6.2e-06 | 26.2 |
| pfu_aug2.0_42.1_06804.t1 | 2 | 1 | Y_phosphatase | 513 | 537 | 0.0 | 203.3 | 3.6 | 4100.0 | -3.2 |
| pfu_aug2.0_42.1_06804.t1 | 2 | 2 | Y_phosphatase | 594 | 824 | 0.0 | 203.3 | 0.0 | 0.0 | 203.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_42.1_06804.t1 | gi|701399964|ref|XP_009996357.1| | PREDICTED: receptor-type tyrosine-protein phosphatase eta [Chaetura pelagica] | 7.0e-40 |
| pfu_aug2.0_42.1_06804.t1 | gi|641799480|ref|XP_008162714.1| | PREDICTED: receptor-type tyrosine-protein phosphatase eta [Chrysemys picta bellii] | 1.0e-39 |
| pfu_aug2.0_42.1_06804.t1 | gi|704581721|ref|XP_010188664.1| | PREDICTED: receptor-type tyrosine-protein phosphatase eta [Mesitornis unicolor] | 1.0e-39 |
| pfu_aug2.0_42.1_06804.t1 | gi|591376732|ref|XP_007063032.1| | PREDICTED: receptor-type tyrosine-protein phosphatase eta-like, partial [Chelonia mydas] | 2.0e-39 |
| pfu_aug2.0_42.1_06804.t1 | gi|701332596|ref|XP_009978859.1| | PREDICTED: receptor-type tyrosine-protein phosphatase eta, partial [Tauraco erythrolophus] | 4.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_42.1_06804.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_42.1_06804.t1 atgccacagaacctggctgtcagtaacatagagagtaggaatttcacagtcacattcaataagccagccacaacaaatgg taaactgataggatatgtactgtttgtgtatcaggaggagaagacaccacagaaatgtgtacaacagattctatttagat gttctgattgtggtaataattacatgtttatacagccaaatcaaacttgttcagcaagtgcagtataccaggatgtatca aacctaccagacacaccctcaatatcatacatggtgatggacctactaccttatatggattacactgtagagacagcagg tattactaatgctggagagggcaacctggctatgctacagaacactatcaagactggacaagaagccctggttctacctc ttcccgaggctcactctcgcggcaacaaatgtagtagggtaggaaaagatgtgcccagaccggggttcgaacccgggacc tctctacctgcagaaccaaataaaccgactatcacagcagtgacagatatagtgcagacacaaattaaacttcaatggaa catagcaggacctagaccagggcccaccaatatcacagtaacagtgtatgaaatcataggaaatacacgatctgtgaaca agactgttctatttgaatcagcatttgatagaacagacttcatactgattgatcttgaagaatattgggattaccagttt actgttacagcagctactgttataggctctgttacttcagatatgtctgctgtttacaggaccttaccgactgctcctgg taaagtattggatcttgctgtttttagagcttcatcagataactacacagctgtacaagtatcatggaaaatcccacctt tacatcaaaggaacagctacctggataaatacatcattgtccagaacttttctacggaagccaacaataatgtagagatt cctgtcaacttgaatctagaaacaaacatgctgatgtttaatgtgacaccagaaacttactacagtgtggaggtctatgc caaaaataacgagtcatcaaacagcgatggggagaaatcacagatgatttattatgcacctcctggtccaccaaaaacaa ctacagtacagagcgtagtgacaacagccccaggtggtgaacaagctcagacgtcaacgtttctagtggaactaaatata aaccctttcggtgacaacacaaatggccaggtggaatactatggtcttgctgtatgtagaagagacaaatatattgagct tacagtgcagcagggtgcttcgtcgtttgcatggagaaatctacctaattaccagacagccaagtaccaaggttatcctc catacagggtgacagatggaagattcattcaaagagtaactcaaaccattcctccagatgaaggggctcccattggtgtc attgttggggtcctaactgcagtggctgtggtcactgtcattgtcattgtctttgtggtagtacgacacagacgaagatt gaaaatgttacataagaagaaagaaaacacgtacacagaattggcaatacgaaatatgaatcatacgcaatcacgggatg aagcatatacttctcttcagatcagaactatcagacgaaacaggcccattcctgtcaccaattttctggtacaaaagatg gaattagaagctgacagtaaaagatcactggccattgaattcaatgacctgacgtctttatcggtatctgtcccctgtac caaagcaagccatgcaataaatcgccataaaaacagatctccaagtattataccaagtgattcaaagcgactgaaacttg gtgaaaagagtgacacaactgaggactacattaatgcttctttaattcagattccattaatgtcagatcacttcgaatgt atagctacacaacatccgttaccagagaccacttcagatttctggcaaatggtctgggaacgcaacgtatctttcattat catgctcaactcagtttctgaatgcgagagtgtgcagtactggccgatcgaagaaggtggctccaagtcttatggtgctt tctctgttaaagttgttgcctgcttttcctacggggataaaagcgtacatcgaatgttcgaagtttcaaagggcaagaaa gtgaagaatatcaagcagttacattttgaaaattggagaacattttcaaaacgagacgtaaatccaatgcttgacttcct agaaactatggaaactaatattgaaaaatccaaaactcgaacaagcactgttatacattgcagtgacggatctggaagga caggtgtttacatttgtgtgcatattcttgtatctttgataaaaaaaggcgcatccaaagttgatgtatttgatacagct catcgtctcctccaatcccggaaaaacataattgagacagaggagcaataccatttcatctacgaatgtctcggtacctt catcaccaaaagatcaaagggtggtggttccatgcctcgccagtctatccaatacaacagtatacagcggtatgcgactg ctaatgacaaggatgtttatgaacagttaccctag |
|
Protein
| Protein ID | pfu_aug2.0_42.1_06804.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_42.1_06804.t1 MPQNLAVSNIESRNFTVTFNKPATTNGKLIGYVLFVYQEEKTPQKCVQQILFRCSDCGNNYMFIQPNQTCSASAVYQDVS NLPDTPSISYMVMDLLPYMDYTVETAGITNAGEGNLAMLQNTIKTGQEALVLPLPEAHSRGNKCSRVGKDVPRPGFEPGT SLPAEPNKPTITAVTDIVQTQIKLQWNIAGPRPGPTNITVTVYEIIGNTRSVNKTVLFESAFDRTDFILIDLEEYWDYQF TVTAATVIGSVTSDMSAVYRTLPTAPGKVLDLAVFRASSDNYTAVQVSWKIPPLHQRNSYLDKYIIVQNFSTEANNNVEI PVNLNLETNMLMFNVTPETYYSVEVYAKNNESSNSDGEKSQMIYYAPPGPPKTTTVQSVVTTAPGGEQAQTSTFLVELNI NPFGDNTNGQVEYYGLAVCRRDKYIELTVQQGASSFAWRNLPNYQTAKYQGYPPYRVTDGRFIQRVTQTIPPDEGAPIGV IVGVLTAVAVVTVIVIVFVVVRHRRRLKMLHKKKENTYTELAIRNMNHTQSRDEAYTSLQIRTIRRNRPIPVTNFLVQKM ELEADSKRSLAIEFNDLTSLSVSVPCTKASHAINRHKNRSPSIIPSDSKRLKLGEKSDTTEDYINASLIQIPLMSDHFEC IATQHPLPETTSDFWQMVWERNVSFIIMLNSVSECESVQYWPIEEGGSKSYGAFSVKVVACFSYGDKSVHRMFEVSKGKK VKNIKQLHFENWRTFSKRDVNPMLDFLETMETNIEKSKTRTSTVIHCSDGSGRTGVYICVHILVSLIKKGASKVDVFDTA HRLLQSRKNIIETEEQYHFIYECLGTFITKRSKGGGSMPRQSIQYNSIQRYATANDKDVYEQLP |
|