Gene
| Gene Model ID | pfu_aug2.0_42.1_06807 |
|---|---|
| Locus | scaffold42.1 : 136802 ... 140425 : - |
| To GenomeBrowser | scaffold42.1:136802..140425 |
| Genes list of scaffold | scaffold42.1 |
| Synonym | pfu_aug1.0_253030.1_06991 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_42.1_06807.t1 | 3 | 1 | GST_N | 5 | 73 | 1.4e-20 | 73.2 | 2.2e-23 | 5.4e-20 | 71.3 |
| pfu_aug2.0_42.1_06807.t1 | 2 | 1 | GST_N_3 | 18 | 76 | 1.5e-06 | 28.3 | 1.7e-09 | 4.2e-06 | 26.8 |
| pfu_aug2.0_42.1_06807.t1 | 1 | 1 | GST_C | 97 | 186 | 3.5e-12 | 46.1 | 2.4e-15 | 5.9e-12 | 45.4 |
| pfu_aug2.0_42.1_06807.t1 | 3 | 2 | GST_N | 100 | 119 | 1.4e-20 | 73.2 | 3.7 | 9100.0 | -3.1 |
| pfu_aug2.0_42.1_06807.t1 | 1 | 1 | GST_C_3 | 109 | 166 | 2.3e-06 | 27.9 | 1.6e-09 | 4.0e-06 | 27.2 |
| pfu_aug2.0_42.1_06807.t1 | 3 | 3 | GST_N | 155 | 177 | 1.4e-20 | 73.2 | 2.0 | 4900.0 | -2.3 |
| pfu_aug2.0_42.1_06807.t1 | 2 | 2 | GST_N_3 | 170 | 196 | 1.5e-06 | 28.3 | 2.6 | 6400.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_42.1_06807.t1 | gi|676454273|ref|XP_009053627.1| | hypothetical protein LOTGIDRAFT_160331 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_42.1_06807.t1 | gi|156395647|ref|XP_001637222.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_42.1_06807.t1 | gi|291222965|ref|XP_002731490.1| | PREDICTED: S-crystallin SL11-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_42.1_06807.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_42.1_06807.t1 atgcctaaatatattctacattattttaacgtcagaggacgaggggaaatcattcggctagtgtttactgctgctggaaa ggactttgaggaccgtcgcgtatcatttgaggaatggccaactctgaaaccaaaaatgcccactggtcagatgccgttat tggagatggacggcaagaagatgtctcagagcatggccatagcacgatacctcgccagagaattcggtttagcaggtaag aacagtctagagcagtttcaggtggatcaagtggtggaccagctaagtgacctgatgacagaatcctataaacctatctt cgaaaaagacgaaacgagaaaggcagagatgacaaagaaattacaagaggaaacattccctaagacgatggatatcctta ccaagtacctggacagtaatggaggggactacttcgtgggacaagggctgactttggcagacctcttctgctatgaagcc ctaactcttgctgtatcaaaggacgaaaatgccctgaagaaatggccaaagctggcattacataggaaacgtgtggaggg ggcaccaaggataggagactacttagcacggagacccgtcacagaattctga |
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Protein
| Protein ID | pfu_aug2.0_42.1_06807.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_42.1_06807.t1 MPKYILHYFNVRGRGEIIRLVFTAAGKDFEDRRVSFEEWPTLKPKMPTGQMPLLEMDGKKMSQSMAIARYLAREFGLAGK NSLEQFQVDQVVDQLSDLMTESYKPIFEKDETRKAEMTKKLQEETFPKTMDILTKYLDSNGGDYFVGQGLTLADLFCYEA LTLAVSKDENALKKWPKLALHRKRVEGAPRIGDYLARRPVTEF |
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