Gene
| Gene Model ID | pfu_aug2.0_42.1_06812 |
|---|---|
| Locus | scaffold42.1 : 268929 ... 279197 : - |
| To GenomeBrowser | scaffold42.1:268929..279197 |
| Genes list of scaffold | scaffold42.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tensin-1-like isoform x2 | GO:0003779 GO:0005737 GO:0005856 GO:0005925 GO:0007044 GO:0008284 GO:0009986 GO:0010761 GO:0035556 GO:0044822 GO:0046872 GO:0048286 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_42.1_06812.t1 | 2 | 1 | PTEN_C2 | 176 | 213 | 1.1e-17 | 64.0 | 9.0e-11 | 3.3e-07 | 30.0 |
| pfu_aug2.0_42.1_06812.t1 | 2 | 2 | PTEN_C2 | 234 | 280 | 1.1e-17 | 64.0 | 2.4e-11 | 9.0e-08 | 31.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_42.1_06812.t1 | gi|676483524|ref|XP_009063052.1| | hypothetical protein LOTGIDRAFT_129445, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_42.1_06812.t1 | gi|657599719|ref|XP_008304683.1| | PREDICTED: tensin-like, partial [Stegastes partitus] | 0.0 |
| pfu_aug2.0_42.1_06812.t1 | gi|698449866|ref|XP_009818658.1| | PREDICTED: tensin-3-like, partial [Gavia stellata] | 0.0 |
| pfu_aug2.0_42.1_06812.t1 | gi|335303386|ref|XP_003133698.2| | PREDICTED: tensin-1-like isoform X1 [Sus scrofa] | 0.0 |
| pfu_aug2.0_42.1_06812.t1 | gi|591352621|ref|XP_007070757.1| | PREDICTED: tensin-like [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_42.1_06812.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_42.1_06812.t1 atggcggaggaccaagttgaaatggaccttgtgtacatcacggagagactcatctccatgtcgttcccatcggacgaaca agaagcatcctaccagtataaccttaaaggtgtaatgggtatgcttcgtggtaaacatggagagaatgtcctaatcctca acttctcagaacctaggaatgacctacagaaggaaaataatcagagagtgatagactatggttggccggatcatctagcc ccgccccttgaaaggctgtgtaacatctgtaagtcaatagattcctggttgaactctgaccccagtcacgtggttgtgct gcatagtaaaggaggtcgaggtcgcttggctgttgtcatagcggcattcatgcactacagtagcatttgtgccagcgctg accaggcgatggacagaatggccatgaagagatattttgacgacaaactatcaggatatctatatccctcacataaaaga tacgtacagtatttttctgggttgttgtccggtgcaataaaaatcaactcccacgccttgtaccttcatcatctcgttat acatggggtacctaactttgacacccacgggggttgtcgccccttcatcaaggtgtaccaagggatgcaaccaatcttca cttccggtgtctaatacgtacagtatttttctgggttgttgtccggtgcaataaaaatcaactcccacgccttgtacctt catcatctcgttatacatggggtacctaactttgacacccacgggggttgtcgccccttcatcaaggtgtaccaagggat gcaaccaatcttcacttccggtgtctaggcagaagtcaaagatgctccccattcagctacatcgcggaatgattggggat acattactcttattacggtgcaatgtcacagaccagatgcagaaggtgtgtatttcgatttctccggggattcccctccg tggtga |
|
Protein
| Protein ID | pfu_aug2.0_42.1_06812.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_42.1_06812.t1 MAEDQVEMDLVYITERLISMSFPSDEQEASYQYNLKGVMGMLRGKHGENVLILNFSEPRNDLQKENNQRVIDYGWPDHLA PPLERLCNICKSIDSWLNSDPSHVVVLHSKGGRGRLAVVIAAFMHYSSICASADQAMDRMAMKRYFDDKLSGYLYPSHKR YVQYFSGLLSGAIKINSHALYLHHLVIHGVPNFDTHGGCRPFIKVYQGMQPIFTSGVXYVQYFSGLLSGAIKINSHALYL HHLVIHGVPNFDTHGGCRPFIKVYQGMQPIFTSGVXAEVKDAPHSATSRNDWGYITLITVQCHRPDAEGVYFDFSGDSPP W |
|