Gene
| Gene Model ID | pfu_aug2.0_42.1_06813 |
|---|---|
| Locus | scaffold42.1 : 279244 ... 323927 : - |
| To GenomeBrowser | scaffold42.1:279244..323927 |
| Genes list of scaffold | scaffold42.1 |
| Synonym | pfu_aug1.0_10442.1_10137 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_42.1_06813.t1 | 1 | 1 | C1_1 | 23 | 66 | 7.7e-06 | 25.5 | 1.2e-09 | 1.8e-05 | 24.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_42.1_06813.t1 | gi|524891550|ref|XP_005102308.1| | PREDICTED: microtubule-associated protein futsch-like isoform X1 [Aplysia californica] | 3.0e-12 |
| pfu_aug2.0_42.1_06813.t1 | gi|642924654|ref|XP_008194382.1| | PREDICTED: tensin isoform X8 [Tribolium castaneum] | 8.0e-08 |
| pfu_aug2.0_42.1_06813.t1 | gi|642924642|ref|XP_008194376.1| | PREDICTED: tensin isoform X2 [Tribolium castaneum] | 2.0e-07 |
| pfu_aug2.0_42.1_06813.t1 | gi|642924640|ref|XP_008194375.1| | PREDICTED: tensin isoform X1 [Tribolium castaneum] | 2.0e-07 |
| pfu_aug2.0_42.1_06813.t1 | gi|642924648|ref|XP_008194379.1| | PREDICTED: tensin isoform X5 [Tribolium castaneum] | 2.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_42.1_06813.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_42.1_06813.t1 atgatggatatcagaacactaacgaactcaagatattgcttacaagacgagcctaaagtcattccccatagatttgctca ctactatttccacaagcctcgcacatgcttcctgtgtaaacagaaagtactgactcaaggaagtgcttgtcaagtgtgta gattcatatgtcatcgacaatgtgaaagtaagcaaaaggcgcatacaatgttgaagtttgtatcaacaaaaccacctaga ggcaaatctgatgtccatccggattttcaccgacaggcaaggggtaattttcgagtgaaggcagccaatcaaggcgctga ccttcgcactttcgatggtgaaaattcacgggattttgatggaagggagccacacattattcaacatgaaattcctggaa tagattacgacaatctaccaggagacggtcggcaaagaaaaggagtacaattttacggtcaaaatatgcatgcgcaaccg gaagcgttcaacacaaggtcaaggacacctagcgcaagtagtcaggagtcatctcgaagtttacttcgttcataccaaag tgatctattgggtaggaggaccgggccgtaccgtcatgtcacctggagcccggatgtaacaaatgggaacaagccacaaa tgggacatccgctcgctgatatgcaattcaggaaacgagacgggaatagtaaagacaagaaacaaagtagctttgctaag tcaggcaaaaaatctcttcagggcatttcacgatttttactcggtgattccaacaaaaagaataagcaagattcgggaga tgaaattgaaatggataacttacatcgcgacagcgttgaaaacagccacgcgatcatctctgattatctaaaatctgtcg aaaaacctgctgattctgatcaacatgcacgaacttcaaccaatcaggttcatgatacatcgatttcaaccaatcgaaag aaaggatccaaatataaatcatctgaaacggaatcgaaaacaaaacgatcaagtccatggtcattgcacaaggtcattca tcattttcagaatagaaaggataaccagggtcaaggaccgccgcctgaacaacgtaaattggatttaaagggtgaaaaac atgagatcgatccgggtggtgaggattattacgataatcaagacacttccggttccggtagagatcagtttactcccgga aggacagagaaaattgatgtcgttcattcgcctccaaaaccttcacagagttcaaaattcgttttctcacctatatattc tagcactccgaaaaagaaagatatggagaaacccaagaatgtgaaaaatctatctgttaatgatgaaaaacgtcgctatg aaggaaatgcgattccgatcgcctcgacatgggaacaaagaccgttttcatctgactatgaggaaattcggactactgac aacagttctttatctcaggttacacaaaatgtcatcgagcaaacgagtgtccctcagtcgaaatctgcgagtggtggaaa tgtgtcacatgattctgacgtcacagcgaaacattcgcaatctcatttcaggaagcggaagcggacatatccaggattga atttaagtccatatagggatgcttctaaatttgacatcgctagaccagtaccgcagcattcacgctcggctcaacattca caaaaggaaggagtttactcaaaaatcaaacactcccctccaccgacagcgtcacgtgacctggaaatcaacacaagttc cagtcagacgagagacgggaaagtcgagaagtcgaaggttatgacatcgtgtgtaccacagattaaccatgacatgatta cgcagcgtaggtgtaaacaagtttacacaaatcttcaagacttagaacttgttccccgcgaacacctggtgtcacacgtg gttgatttcggtctttga |
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Protein
| Protein ID | pfu_aug2.0_42.1_06813.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_42.1_06813.t1 MMDIRTLTNSRYCLQDEPKVIPHRFAHYYFHKPRTCFLCKQKVLTQGSACQVCRFICHRQCESKQKAHTMLKFVSTKPPR GKSDVHPDFHRQARGNFRVKAANQGADLRTFDGENSRDFDGREPHIIQHEIPGIDYDNLPGDGRQRKGVQFYGQNMHAQP EAFNTRSRTPSASSQESSRSLLRSYQSDLLGRRTGPYRHVTWSPDVTNGNKPQMGHPLADMQFRKRDGNSKDKKQSSFAK SGKKSLQGISRFLLGDSNKKNKQDSGDEIEMDNLHRDSVENSHAIISDYLKSVEKPADSDQHARTSTNQVHDTSISTNRK KGSKYKSSETESKTKRSSPWSLHKVIHHFQNRKDNQGQGPPPEQRKLDLKGEKHEIDPGGEDYYDNQDTSGSGRDQFTPG RTEKIDVVHSPPKPSQSSKFVFSPIYSSTPKKKDMEKPKNVKNLSVNDEKRRYEGNAIPIASTWEQRPFSSDYEEIRTTD NSSLSQVTQNVIEQTSVPQSKSASGGNVSHDSDVTAKHSQSHFRKRKRTYPGLNLSPYRDASKFDIARPVPQHSRSAQHS QKEGVYSKIKHSPPPTASRDLEINTSSSQTRDGKVEKSKVMTSCVPQINHDMITQRRCKQVYTNLQDLELVPREHLVSHV VDFGL |
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