Gene
| Gene Model ID | pfu_aug2.0_42.1_06815 |
|---|---|
| Locus | scaffold42.1 : 380079 ... 382309 : + |
| To GenomeBrowser | scaffold42.1:380079..382309 |
| Genes list of scaffold | scaffold42.1 |
| Synonym | pfu_aug1.0_262.1_65324 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_42.1_06815.t1 | 1 | 1 | RVT_1 | 2 | 152 | 2.9e-21 | 75.8 | 3.6e-25 | 5.4e-21 | 74.9 |
Transcript
| Transcript ID | pfu_aug2.0_42.1_06815.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_42.1_06815.t1 atgtgcgttgatttccgccaattaaatatcaggacaaagaaagactcttactcacttcctagaacagaagacattctcaa tgctctttctggcaacaaattcttctcaatattggacatgaaaagtggatatcaccagatcgaaatgtatgaaccacaca aggaacgaactgcgttcaccgtaggaccattggggttttacgaattcaacagaatgccgttcggtttggtgaatgcaccc gctacgtatcaacggctaatggaagaatgttttcagggactgcatttagatatctgctacatctacttagacgacatagt catcttttcgaaaacatttgaggaacatatggaacgtctagaaaaagtatttaaaagatttcgagaggttaatctgaaat tatctccgaagaagtgtgacctgttcaagagaaaagtctgttatgttggacacattgtatctcaagaaggaatcgaacca gatccgaagaaaatcgaaaaagttcgtcagtggccacagccatcaaatccagacgaagtccgtaaatttttggggttcgt tggatactataggagattcatccaaaatttttccaagatatctcgacctttagcagacttgatcgttgaaccaacaaaga aagcaagaagaaagtctaaaaacagtttcaaaccggacaagtgggaatgggggaaggagcaagaaaccgcattcaatctg cttaaagacaaacttacatcttttcccattcttggatacccagatttcagcaaaccgttcgagttacacactgacgcatc gacaaaaggtctaggagctattctttatcaagagcaggatggcgtcaaacgagttatcgcatacgcaagcagaggattga cgaaatcagagcgtaactatcccgtacacaagctcgagttccttgcgttgaaatggtcaatttcagagaaattttatgac tatttatatggaaacacattcagcgtctttaccgacaataacccacttacttacatcctttcatctgcaaaattggatgc gactggtcaaagatgggttgcttcgctagcatcattcaacttctccatcacttaccgttctggacatcacaacagggatg ctgatgcgttatcacgtttaccaggaatcatagaagaacgtgaaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaa aaaaatcattatgaaagcaaaacaagaggtgccgttcttcagacaggagacagagtcttagtcaaaatacttgcgtttga cgggaaacacaaacttgctaacaaatgggaagaggatccatacaaaattttgtcgaaaccgaatcccgatattccagtgt atatagttcaaaaaaagaatggagaaggaagaaaacgaacattgcacagaaacaatttattaccgcttaacatagatttt aacgaaacgtctacggagaaatcaagaaagaagccgacaccaacacctagaaaaagtatatcatcttcgaataagttaga aacaaagcgaaatactgaacatacaagtgactcagattcagatgaagatatggaaatagttgagattagtgagattagag aaatctccaatcctccggaaactataattaggacacagggatcagaagacagcattgaagaagatggggatgacgctgat gacgatcagttaaccatttacatcactgatagggttgaagatgaggacgctcatgatcgcatgcaatcagatgaaccacg agactctaccctagcagaaacagacgaggtcgaagatgatagtattccatcaagaagatcaggtagacaacgagcaaagc caagatggatggaaagtggagactacgttcttatgcaacaaacattaccagattggaaagctagagccgattttcttcaa gatttagttaagtctgcttttctgacttcagtagatagttctgtctcatcagcgctcattgatattgtcttgggaaagaa gtag |
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Protein
| Protein ID | pfu_aug2.0_42.1_06815.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_42.1_06815.t1 MCVDFRQLNIRTKKDSYSLPRTEDILNALSGNKFFSILDMKSGYHQIEMYEPHKERTAFTVGPLGFYEFNRMPFGLVNAP ATYQRLMEECFQGLHLDICYIYLDDIVIFSKTFEEHMERLEKVFKRFREVNLKLSPKKCDLFKRKVCYVGHIVSQEGIEP DPKKIEKVRQWPQPSNPDEVRKFLGFVGYYRRFIQNFSKISRPLADLIVEPTKKARRKSKNSFKPDKWEWGKEQETAFNL LKDKLTSFPILGYPDFSKPFELHTDASTKGLGAILYQEQDGVKRVIAYASRGLTKSERNYPVHKLEFLALKWSISEKFYD YLYGNTFSVFTDNNPLTYILSSAKLDATGQRWVASLASFNFSITYRSGHHNRDADALSRLPGIIEEREXXXXXXXXXXXX KNHYESKTRGAVLQTGDRVLVKILAFDGKHKLANKWEEDPYKILSKPNPDIPVYIVQKKNGEGRKRTLHRNNLLPLNIDF NETSTEKSRKKPTPTPRKSISSSNKLETKRNTEHTSDSDSDEDMEIVEISEIREISNPPETIIRTQGSEDSIEEDGDDAD DDQLTIYITDRVEDEDAHDRMQSDEPRDSTLAETDEVEDDSIPSRRSGRQRAKPRWMESGDYVLMQQTLPDWKARADFLQ DLVKSAFLTSVDSSVSSALIDIVLGKK |
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