Gene
| Gene Model ID | pfu_aug2.0_421.1_04137 |
|---|---|
| Locus | scaffold421.1 : 1 ... 10061 : + |
| To GenomeBrowser | scaffold421.1:1..10061 |
| Genes list of scaffold | scaffold421.1 |
| Synonym | pfu_aug1.0_5265.1_09081 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_421.1_04137.t1 | 2 | 1 | Ribosomal_L24e | 1 | 44 | 4.1e-16 | 58.5 | 8.4e-20 | 4.1e-16 | 58.5 |
| pfu_aug2.0_421.1_04137.t1 | 2 | 2 | Ribosomal_L24e | 61 | 79 | 4.1e-16 | 58.5 | 0.2 | 1000.0 | -0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_421.1_04137.t1 | gi|524864130|ref|XP_005088903.1| | PREDICTED: 60S ribosomal protein L24-like [Aplysia californica] | 1.4013e-45 |
| pfu_aug2.0_421.1_04137.t1 | gi|91078162|ref|XP_966448.1| | PREDICTED: 60S ribosomal protein L24 [Tribolium castaneum] | 4.2039e-45 |
| pfu_aug2.0_421.1_04137.t1 | gi|759065302|ref|XP_011342079.1| | PREDICTED: 60S ribosomal protein L24 [Cerapachys biroi] | 1.96182e-44 |
| pfu_aug2.0_421.1_04137.t1 | gi|591374006|ref|XP_007061696.1| | PREDICTED: 60S ribosomal protein L24 [Chelonia mydas] | 2.94273e-44 |
| pfu_aug2.0_421.1_04137.t1 | gi|725595797|ref|XP_010348350.1| | PREDICTED: 60S ribosomal protein L24 [Saimiri boliviensis boliviensis] | 7.9874e-44 |
Transcript
| Transcript ID | pfu_aug2.0_421.1_04137.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_421.1_04137.t1 gtgttccaattcttgaacggaaaatgtgaagcttcacatttaatgaagagaaaccctcgtgaaatcagctggacagtttt atatagaaggaaacacaagaagggtcaaactgaggaggtgtcaaagaaaaggaccagaaggacacagaaattcacacgtg ctatcacaggggcctcactcacagacatcttagccaagagaaaccagaagccagaggtccgaaaagctcagagagaacaa gccattaggtgtgtttcacagcctaaacaacagaaagctccaaaaatggcacagaaaggtggaactaagccacgtgtcgg tggaaaacgataa |
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Protein
| Protein ID | pfu_aug2.0_421.1_04137.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_421.1_04137.t1 VFQFLNGKCEASHLMKRNPREISWTVLYRRKHKKGQTEEVSKKRTRRTQKFTRAITGASLTDILAKRNQKPEVRKAQREQ AIRCVSQPKQQKAPKMAQKGGTKPRVGGKR |
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