Gene
| Gene Model ID | pfu_aug2.0_421.1_04138 |
|---|---|
| Locus | scaffold421.1 : 16586 ... 23869 : + |
| To GenomeBrowser | scaffold421.1:16586..23869 |
| Genes list of scaffold | scaffold421.1 |
| Synonym | pfu_aug1.0_5265.1_09080 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| pcs-1 protein | GO:0010273 GO:0016756 GO:0046872 GO:0046938 GO:0050787 GO:0071585 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_421.1_04138.t1 | 1 | 1 | Phytochelatin | 46 | 122 | 8.6e-24 | 83.6 | 1.1e-27 | 1.7e-23 | 82.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_421.1_04138.t1 | gi|676430709|ref|XP_009046015.1| | hypothetical protein LOTGIDRAFT_137593, partial [Lottia gigantea] | 2.0e-32 |
| pfu_aug2.0_421.1_04138.t1 | gi|675852508|ref|XP_009011814.1| | hypothetical protein HELRODRAFT_167837 [Helobdella robusta] | 2.0e-26 |
| pfu_aug2.0_421.1_04138.t1 | gi|524911978|ref|XP_005110845.1| | PREDICTED: glutathione gamma-glutamylcysteinyltransferase 2-like [Aplysia californica] | 3.0e-26 |
| pfu_aug2.0_421.1_04138.t1 | gi|312072379|ref|XP_003139039.1| | PCS-1 protein [Loa loa] | 3.0e-25 |
| pfu_aug2.0_421.1_04138.t1 | gi|193204635|ref|NP_001122615.1| | PCS-1, isoform a [Caenorhabditis elegans] | 1.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_421.1_04138.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_421.1_04138.t1 atgatttttaatcgagcaaaatggatcatccctaactttcgttttatgacatcagcagtttttaaagcttgtaaggattg ttacagaagggtatcaataatgacgtcatcagacaatccaaagccagttcgtcctatctatcgtcgtcctcttccgagtt cctgtatagacttttcatctcccgaaggcaagaacattttccaggaagcattggatgccggaaatatggaatgttacttc cggttggctgcacagtttcggacacaagacgagcccgccttttgtggattgacaactctggttatgactttgaattcact ggaaatagatcctggccaagtgtggaaagggaaaccacgtggatacatgataatgagcaggtacgagggttcaagcatgc tcactctcttccgaatttcctcatcgttttccgtcacgtatccaggagcttatactgatgacgtatcggatttcgtcaca aaatggcagtcatggttagcagaagaatgctcagacgacatcgatgaaaagcgtctgattcacacagcagtcagtcgtct gctgcagttttccacaacgatcacctcttgtgaaagcgttctcacgacgcaagttgacttccagtgcctttcggaaaatc atgcctgtgaatgcaatggattgttggacgcactagatagtacagatgtttttaaagaaataaagagtaaaatagaagag gagagaaataccagcgtccttgatagaataggtcatactgctaaagagcttagcatatcgtctgctaaaagacagaaatc ctgtctcgtggagagaatttcggccgctcattttgtcagcacattactgctgtgctggccatataacatcaacccgtgca taaaggagaacagatatgcttacaagctagataaaatgatggctaccattctcagtgactgtaaaaaagttctcttctac gaaatacaaatattgagaagacaatttacaatattgctgacaaaaagaaggaaactggattgctgtaaataa |
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Protein
| Protein ID | pfu_aug2.0_421.1_04138.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_421.1_04138.t1 MIFNRAKWIIPNFRFMTSAVFKACKDCYRRVSIMTSSDNPKPVRPIYRRPLPSSCIDFSSPEGKNIFQEALDAGNMECYF RLAAQFRTQDEPAFCGLTTLVMTLNSLEIDPGQVWKGKPRGYMIMSRYEGSSMLTLFRISSSFSVTYPGAYTDDVSDFVT KWQSWLAEECSDDIDEKRLIHTAVSRLLQFSTTITSCESVLTTQVDFQCLSENHACECNGLLDALDSTDVFKEIKSKIEE ERNTSVLDRIGHTAKELSISSAKRQKSCLVERISAAHFVSTLLLCWPYNINPCIKENRYAYKLDKMMATILSDCKKVLFY EIQILRRQFTILLTKRRKLDCCK |
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