Gene
| Gene Model ID | pfu_aug2.0_421.1_04142 |
|---|---|
| Locus | scaffold421.1 : 64289 ... 68845 : - |
| To GenomeBrowser | scaffold421.1:64289..68845 |
| Genes list of scaffold | scaffold421.1 |
| Synonym | pfu_aug1.0_29952.1_55323 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_421.1_04142.t1 | 1 | 1 | DUF3504 | 146 | 281 | 3.2e-11 | 43.2 | 4.6e-15 | 6.9e-11 | 42.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_421.1_04142.t1 | gi|727060562|ref|XP_010408987.1| | PREDICTED: activating transcription factor 7-interacting protein 1 isoform X2 [Corvus cornix cornix] | 2.0e-25 |
| pfu_aug2.0_421.1_04142.t1 | gi|727060559|ref|XP_010408986.1| | PREDICTED: activating transcription factor 7-interacting protein 1 isoform X1 [Corvus cornix cornix] | 2.0e-25 |
| pfu_aug2.0_421.1_04142.t1 | gi|704335886|ref|XP_010173635.1| | PREDICTED: BTB/POZ domain-containing protein KCTD1, partial [Caprimulgus carolinensis] | 4.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_421.1_04142.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_421.1_04142.t1 atggcgaccctactgcgatctaaatcgacggcgttcccacggcgactgtttgtgcatgcatgtccaaaacaaacgccatg gttcggcgtcctatgcgatctcatggagtccattgcgatgacacgacaatggctgatttcacaaggagaggatcctaact ttgaaggtattcccgcctccattctgaaccgttacctatgtctgttctaccaatccaagaacatggatcagtatccgctt ctggctttctttgctgtggaactcacgcggtatttgacgggaccaccattttacagggatattgatgtcgtgaataaccc ggaattcgagacatcgaatcgggttctaaatcctagtgagggtcaaggagaaataccaccatctcatacaaaaatgagaa gtgtcgagtatccaacttgcataaaatttgaccatctccgggaactctatgccagcgattgtctatctggatacgatcag ttttctcttcagaacaaagtttggatggacgttaatttgtactttggaggctttacccgacagcatctacgcgacatgaa gaaaacgtcctttcttttagagaatgatcccgaggagggacgaaggtactaccgaatcgtcgaccctaagttaaatgcat cattaagtacgaggatgtacgaacagccgggacatgcgtcatgtccggtcagcacgatggaacgatacctaatgtatctc aaccctgattcagacgttttctttcaacaaccttgctcgaccgatgaaataaagtcaaaaagaagttggtactcactcac acctatcggtaagaacatgcacagccacagactttccgccatttgtaaaaatatcggcatatatggccaattgcggaaca cgtccatgcgccatctgtcccgccagatccactcacgttattcagattttacgccgaggtacagtgataaactgttcggt atagtgtcaggtacagagggagatcctttcaatggaatctatatttag |
|
Protein
| Protein ID | pfu_aug2.0_421.1_04142.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_421.1_04142.t1 MATLLRSKSTAFPRRLFVHACPKQTPWFGVLCDLMESIAMTRQWLISQGEDPNFEGIPASILNRYLCLFYQSKNMDQYPL LAFFAVELTRYLTGPPFYRDIDVVNNPEFETSNRVLNPSEGQGEIPPSHTKMRSVEYPTCIKFDHLRELYASDCLSGYDQ FSLQNKVWMDVNLYFGGFTRQHLRDMKKTSFLLENDPEEGRRYYRIVDPKLNASLSTRMYEQPGHASCPVSTMERYLMYL NPDSDVFFQQPCSTDEIKSKRSWYSLTPIGKNMHSHRLSAICKNIGIYGQLRNTSMRHLSRQIHSRYSDFTPRYSDKLFG IVSGTEGDPFNGIYI |
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