Gene
| Gene Model ID | pfu_aug2.0_421.1_04144 |
|---|---|
| Locus | scaffold421.1 : 74393 ... 77255 : - |
| To GenomeBrowser | scaffold421.1:74393..77255 |
| Genes list of scaffold | scaffold421.1 |
| Synonym | pfu_aug1.0_1268.1_58425 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_421.1_04144.t1 | 1 | 1 | DUF3504 | 116 | 265 | 3.4e-12 | 46.4 | 3.4e-16 | 5.1e-12 | 45.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_421.1_04144.t1 | gi|697011331|ref|XP_009573642.1| | PREDICTED: activating transcription factor 7-interacting protein 1-like [Fulmarus glacialis] | 1.0e-23 |
| pfu_aug2.0_421.1_04144.t1 | gi|690422544|ref|XP_009320416.1| | PREDICTED: activating transcription factor 7-interacting protein 1 isoform X2 [Pygoscelis adeliae] | 1.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_421.1_04144.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_421.1_04144.t1 atggccgcggacgatgtctcctcagaaggctttcatatgaattccgagcaactacagaaagtcaatgtggctattggact attcagaggatggctaacatcggaaaatcttccaacatcattcgaaaaattttcaccgccgagactgaacgacgtgttag aacaattttactccgatttcaagtcgatgcatgcaggtccttttaacatcaataagctcggcgacgtacgggaggggctg ttcacttatcttaaaggagttaacagtacgtggaaaaactacctcagtcaccccgcacatactcaaaaatacaaagtgaa cgaagtaaagcgaaaggtgtcgatgtctggtgatgacgtcagaaggctgatgaattccggtgttctcgatatagatactc ctctaggactgttcaggaaggtctggcttgacctcgccattcatttaggaattggtggacaggcggcgatgaggtcctta acattcgattcgttcgtcgcggaaacagacgacaaaggcagacgatattatcgtctgaatcgcgatggcgtcgatagaca gcaagcaagatcgtgtatggagatgcagtattggaattgggaagggaaaatgtacgaaatcagcaacgaccgactttgtc ctgttaaatcaatggatcggtattatgagagaagaaacatgatgagggaatcgttttttcaacgccccaaaacatctgtg catcatctagaaacgtcttggttcgaatctcctgtaggacatagtgttctggcttgtttgttgaccaaaatgtcagaaga gagtatgctacagaaatcgtacaccaattctagtctgaaaataacgcttgccgactttttggaggcggaaggatatgacg ttgaggagttactgggtgtacatccgcgaaataaaacaacaaggaactaccgtgctaatctcagaaaacttactgcagac gaactttgtcacaatagttttgtcatacacaacgccctctaccggtttgtagaggatagacaggaaactccacaaaagac gtga |
|
Protein
| Protein ID | pfu_aug2.0_421.1_04144.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_421.1_04144.t1 MAADDVSSEGFHMNSEQLQKVNVAIGLFRGWLTSENLPTSFEKFSPPRLNDVLEQFYSDFKSMHAGPFNINKLGDVREGL FTYLKGVNSTWKNYLSHPAHTQKYKVNEVKRKVSMSGDDVRRLMNSGVLDIDTPLGLFRKVWLDLAIHLGIGGQAAMRSL TFDSFVAETDDKGRRYYRLNRDGVDRQQARSCMEMQYWNWEGKMYEISNDRLCPVKSMDRYYERRNMMRESFFQRPKTSV HHLETSWFESPVGHSVLACLLTKMSEESMLQKSYTNSSLKITLADFLEAEGYDVEELLGVHPRNKTTRNYRANLRKLTAD ELCHNSFVIHNALYRFVEDRQETPQKT |
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