Gene
| Gene Model ID | pfu_aug2.0_421.1_04146 |
|---|---|
| Locus | scaffold421.1 : 85717 ... 104705 : - |
| To GenomeBrowser | scaffold421.1:85717..104705 |
| Genes list of scaffold | scaffold421.1 |
| Synonym | pfu_aug1.0_1268.1_58424 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_421.1_04146.t2 | 1 | 1 | BTB | 3 | 99 | 1.3e-12 | 47.6 | 7.5e-16 | 2.2e-12 | 46.9 |
Transcript
| Transcript ID | pfu_aug2.0_421.1_04146.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_421.1_04146.t1 atgtggaagagccaagttctatgtgatgctatcatacgcacaggaaccgtcataacaaaggcacacagactggttttggt cgcggcttgtccaatgctacagtcaatggagaatgcatccatgggatctcatcttgaggttagacttgcctctgatatca aacaggactctgttaatacattcctacaatatctttatgaaggatttatgatgcttacagaagaaaactgcaaagacgtg gaaaaaatagcgagactcctacaagtagacagtattataaagtgcatatctgacttttacaaatgcctaagtgccaaaac tggatgtaacattgatgataggtacaaatactcgtcttttgacttactggagttcaaacatatcagggcttcctctattc agaagacattacacgaagcagccctgaaaagaggatccgatttttccagaccacaaagcccaggaaataagcgtcagcga ctgcatagagcccccagtcccaatgattccaggctgaatcaaagggcagatgacacgctcagcatggcacatagctacac acagggcgggcagggccgagacccttgggatccgaggggtaggggagggacaagagttccccctcaaccaggtgtgatag acattgtagaagatagcattgaaataatccagtcggatcagtctgataagggagacggacatataaaacagaaaagtgtc tcaataggagtgactagtcagtacaatacagccaccgatgtccgagtcgtcagtgttaatgactcaggcgggactggcaa acttcatacatcaggtgctaaatcacatgacccactgcagaactcaaatagtgacgctcgtggttctataacagtcagtc ccttgccaatatttgattcttcatctagtcagtcatcaatcaataggacatcagactcacaaatggacattccgtcagta cgccccaccccaccctcacagcctgtttttcccaccctcacccctataccaaagcagtctgtaccaaagccttttgccgc aggaagcatgtcacaagcaacatcatcgccttcatcatcagaggctaagtcagtatcccccttgaatgcagatcacacag ataaaagggatacggctaacaaagacgacgtcatctcagaagacggaacacccgatttgaagattgtaaaaatcgagact aacgacagtctcacgggtggtttagatatgtatgtagataaaggtgaagatggaatgttaagactacacggaatagagga cgggcaaaatgacgatggcagtgatgtggaacatgatcattctgtcgattggtcaaaagaagaaatgtcaaatgaaggca gcaatgttagcactgaccagaataattcctggtacatagaccaattcaaaggaaccagagaaagtattgttgaagacatt ccgcggaaaatttgggaaacaccgcaacatggaatacatcgggttgtacgcaatgtggaaaataaaccccgcacatgtgt tctgtgtaaatattataatgtaaagactttgaagggctggaaagtgtattctagattccactgttatgcttgcaatgtac ctttatgtacaggggagagaaattgcttcgaaaaatttcaccgtaccgtgtttgacacttcaaacccagccgagaatagg gcgttggtccctcttatgcaggccatagaattcaaccggtctaaaattcaatga |
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| Transcript ID | pfu_aug2.0_421.1_04146.t2 |
| Definition | - |
>pfu_aug2.0_421.1_04146.t2 atgtggaagagccaagttctatgtgatgctatcatacgcacaggaaccgtcataacaaaggcacacagactggttttggt cgcggcttgtccaatgctacagtcaatggagaatgcatccatgggatctcatcttgaggttagacttgcctctgatatca aacaggactctgttaatacattcctacaatatctttatgaaggatttatgatgcttacagaagaaaactgcaaagacgtg gaaaaaatagcgagactcctacaagtagacagtattataaagtgcatatctgacttttacaaatgcctaagtgccaaaac tggatgtaacattgatgataggtacaaatactcgtcttttgacttactggagttcaaacatatcagggcttcctctattc agaagacattacacgaagcagccctgaaaagaggatccgatttttccagaccacaaagcccaggaaataagcgtcagcga ctgcatagagcccccagtcccaatgattccaggctgaatcaaagggcagatgacacgctcagcatggcacatagctacac acagggcgggcagggccgagacccttgggatccgaggggtaggggagggacaagagttccccctcaaccaggtgtgatag acattgtagaagatagcattgaaataatccagtcggatcagtctgataagggagacggacatataaaacagaaaagtgtc tcaataggagtgactagtcagtacaatacagccaccgatgtccgagtcgtcagtgttaatgactcaggcgggactggcaa acttcatacatcaggtgctaaatcacatgacccactgcagaactcaaatagtgacgctcgtggttctataacagtcagtc ccttgccaatatttgattcttcatctagtcagtcatcaatcaataggacatcagactcacaaatggacattccgtcagta cgccccaccccaccctcacagcctgtttttcccaccctcacccctataccaaagcagtctgtaccaaagccttttgccgc aggaagcatgtcacaagcaacatcatcgccttcatcatcagaggctaagtcagtatcccccttgaatgcagatcacacag ataaaagggatacggctaacaaagacgacgtcatctcagaagacggaacacccgatttgaagattgtaaaaatcgagact aacgacagtctcacgggtggtttagatatgtatgtagataaaggtgaagatggaatgttaagactacacggaatagagga cgggcaaaatgacgatggcagtgatgtggaacatgatcattctgtcgattggtcaaaagaagaaatgtcaaatgaaggca gcaatgttagcactgaccagaataattcctggtacatagaccaattcaaagaaaggactaaaatggntccgcccccgcac acttgtcctgtctgtgggaagaaattctatcaaaagtgggagttatctagacattacaatcgcatacacaaagacgtagc ttttccggaagaaaattttgattcttatgaaaagaactatattttgtaa |
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Protein
| Protein ID | pfu_aug2.0_421.1_04146.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_421.1_04146.t1 MWKSQVLCDAIIRTGTVITKAHRLVLVAACPMLQSMENASMGSHLEVRLASDIKQDSVNTFLQYLYEGFMMLTEENCKDV EKIARLLQVDSIIKCISDFYKCLSAKTGCNIDDRYKYSSFDLLEFKHIRASSIQKTLHEAALKRGSDFSRPQSPGNKRQR LHRAPSPNDSRLNQRADDTLSMAHSYTQGGQGRDPWDPRGRGGTRVPPQPGVIDIVEDSIEIIQSDQSDKGDGHIKQKSV SIGVTSQYNTATDVRVVSVNDSGGTGKLHTSGAKSHDPLQNSNSDARGSITVSPLPIFDSSSSQSSINRTSDSQMDIPSV RPTPPSQPVFPTLTPIPKQSVPKPFAAGSMSQATSSPSSSEAKSVSPLNADHTDKRDTANKDDVISEDGTPDLKIVKIET NDSLTGGLDMYVDKGEDGMLRLHGIEDGQNDDGSDVEHDHSVDWSKEEMSNEGSNVSTDQNNSWYIDQFKGTRESIVEDI PRKIWETPQHGIHRVVRNVENKPRTCVLCKYYNVKTLKGWKVYSRFHCYACNVPLCTGERNCFEKFHRTVFDTSNPAENR ALVPLMQAIEFNRSKIQ |
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| Protein ID | pfu_aug2.0_421.1_04146.t2 |
| Definition | - |
>pfu_aug2.0_421.1_04146.t2 MWKSQVLCDAIIRTGTVITKAHRLVLVAACPMLQSMENASMGSHLEVRLASDIKQDSVNTFLQYLYEGFMMLTEENCKDV EKIARLLQVDSIIKCISDFYKCLSAKTGCNIDDRYKYSSFDLLEFKHIRASSIQKTLHEAALKRGSDFSRPQSPGNKRQR LHRAPSPNDSRLNQRADDTLSMAHSYTQGGQGRDPWDPRGRGGTRVPPQPGVIDIVEDSIEIIQSDQSDKGDGHIKQKSV SIGVTSQYNTATDVRVVSVNDSGGTGKLHTSGAKSHDPLQNSNSDARGSITVSPLPIFDSSSSQSSINRTSDSQMDIPSV RPTPPSQPVFPTLTPIPKQSVPKPFAAGSMSQATSSPSSSEAKSVSPLNADHTDKRDTANKDDVISEDGTPDLKIVKIET NDSLTGGLDMYVDKGEDGMLRLHGIEDGQNDDGSDVEHDHSVDWSKEEMSNEGSNVSTDQNNSWYIDQFKERTKMXPPPH TCPVCGKKFYQKWELSRHYNRIHKDVAFPEENFDSYEKNYIL |
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