Gene
| Gene Model ID | pfu_aug2.0_421.1_04155 |
|---|---|
| Locus | scaffold421.1 : 224197 ... 241831 : - |
| To GenomeBrowser | scaffold421.1:224197..241831 |
| Genes list of scaffold | scaffold421.1 |
| Synonym | pfu_aug1.0_35387.1_48196 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_421.1_04155.t1 | 1 | 1 | VWA | 269 | 429 | 2.4e-13 | 50.1 | 7.8e-17 | 3.8e-13 | 49.5 |
| pfu_aug2.0_421.1_04155.t1 | 3 | 1 | CBM_14 | 505 | 554 | 1.5e-08 | 34.4 | 1.6e-10 | 8.0e-07 | 28.8 |
| pfu_aug2.0_421.1_04155.t1 | 3 | 2 | CBM_14 | 569 | 604 | 1.5e-08 | 34.4 | 0.0015 | 7.5 | 6.5 |
| pfu_aug2.0_421.1_04155.t1 | 3 | 3 | CBM_14 | 658 | 675 | 1.5e-08 | 34.4 | 0.0047 | 23.0 | 4.9 |
Transcript
| Transcript ID | pfu_aug2.0_421.1_04155.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_421.1_04155.t1 atgatgcgcataataatgtttattttggtggcagtggtgggaggtgtcttatcacaagaggaggagggtggaggaggagg tgagatggggtactctgagggaagtccagagatggatttctccgtggcagaaggtgacggtgaaaactttatacctcaaa attttgagtcttcttcgccctccaatgtctataccgaggtgcagcctctgggtagtgttgaagatgccgtgacagaggaa ggtcctcaaatggctgcctataccgataacagtggtgatggcatgtccctcggtatagaagagtcttcgcccgagaaatc aagcgaggaaagagatgacgacgacgattacatattcatacctccatacaagaaacgtctaaatcgtctgcagaaatacc tcgaaaatatagacaaaaacactaacgataaatggagatacaataacatattctggtggagattccgtaatcgtaatcaa aaccgcgacaagaaccaagagcccaaacaacccggaccttatcaagaaaaatatgtacctccgcctcagaacacaaaaca ggatcctccagtgacgaacgaaaagatcaacaaaacggaaccaccatctctgaaagagataggtcagcatccttgggact gggtgttgaatgatatccctccgccagactatggaccgacttcccctagtgttactccgccatttgatatggatttcagc actactccgccaacgacgtgggaaatacaaacaaacgtcactaatagagaatggacagtgaataatgaatgtaatagaag agtagacatagtcgctatggtcgacggaaagagtaacgaagctgatttcgaactcctcaaagacagtctgaccaaactgt tatattctatgaggatttctgagagtagagtgaggtttgggcttgttctgaacagcaacgatgctactactcgcttacca ttggtgggcgacagagggaagttattacaaggagtacgggacctaaccagaccaatggatggaaggagaagtgataaagg tctaagtgtaatgagagggatgtttcgtgtaagaggacgatacggtgtacctaaagtaggactggtgatcctcaacgaca aaacagaattccctcaaaagacactagaacaggcgaaacgatcaagagacgaagatgttcgtgttttcacagtaggtata gggaaacaaatcaacactgtggaagttacgtccattgcttatagtccgcaatattcacatagtcttggagactataaaga tttgaaaggttatatctcaaacctggctaaaaatatatgtgagatgtccaaaatggtgggaaaggtgaaaggaagctggg gtagcggtactagtgggggcggaggtggagacgaaggggatccgaatggacctagaggaccctctgctggacgaagaaga aggcagagacatcacggtggatatcatggatcaggaccgtgtgatggttgtaagttgctgaatggagccgcctttaacag acatcctacggactgtgataaatacgtccaatgttacttcgtagccaaaaacgaaatcaaggctgtgtatagagattgtc cgtggggaacattctggaaccaaaccgtcctgacgtgccaagacccaagtgtggcaaaatgccccaatgatccttgtgtt ttttcaagaggcaaaatccggcaataccggagtaaagacagctgtcgttcgtattggcagtgtaacagtcactcccattt gaaatgttgtcccccgggggagcggtatgaggaagaccaagggtgtgtcaaagacaatggtacctgtacagatgcctgtc cacccagaaaagaagaagtgaaagtagaaccagtagtcaaagagccagtggatgttgttggaagttgtgataaaaaacca gtactgaataagaaaaggttctacgaccagtatgtacgtggacacggagacatacgtatgccctgtccgccaggaaccga attcagccctgtcgactgcgcatgctctataatatctgtgtacgaaaatccaagacgtgtaaaaggttgccaacctgaaa taataatggacttcgaagatggcgtccgagacgtttccggtagaatgtcttggattaacaatcagggagtaaatactcgt gatggactggcagtctttgatggaaagaacagaattcttttaccaagattcaacagggctgaatttggcagcaccttcat cgtgcgattacggtataaagagacgggtgaattcaagggcagatctgcagtacaggctctcgtgaacaatggggactgtg gtcaagaaggatccatacaaatatacacaaataatgaaaaagtaggatttgtggtcaaaactaaagaggaacctggaatg cggggaatggaaattcctaagggaactgggtggaaggaagtcgagtatgctgtgatagaaggaagactggagggaagggt tcatggtgtagcttatacaaaggaagctaaaggcgacatagagacgaggaattgtgctttacaaattggatacgggtttg gctatcataattttgttggtctcatggatcagattgagatttacaagtgtaaaccagagaagaaattttctaggtcatga |
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Protein
| Protein ID | pfu_aug2.0_421.1_04155.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_421.1_04155.t1 MMRIIMFILVAVVGGVLSQEEEGGGGGEMGYSEGSPEMDFSVAEGDGENFIPQNFESSSPSNVYTEVQPLGSVEDAVTEE GPQMAAYTDNSGDGMSLGIEESSPEKSSEERDDDDDYIFIPPYKKRLNRLQKYLENIDKNTNDKWRYNNIFWWRFRNRNQ NRDKNQEPKQPGPYQEKYVPPPQNTKQDPPVTNEKINKTEPPSLKEIGQHPWDWVLNDIPPPDYGPTSPSVTPPFDMDFS TTPPTTWEIQTNVTNREWTVNNECNRRVDIVAMVDGKSNEADFELLKDSLTKLLYSMRISESRVRFGLVLNSNDATTRLP LVGDRGKLLQGVRDLTRPMDGRRSDKGLSVMRGMFRVRGRYGVPKVGLVILNDKTEFPQKTLEQAKRSRDEDVRVFTVGI GKQINTVEVTSIAYSPQYSHSLGDYKDLKGYISNLAKNICEMSKMVGKVKGSWGSGTSGGGGGDEGDPNGPRGPSAGRRR RQRHHGGYHGSGPCDGCKLLNGAAFNRHPTDCDKYVQCYFVAKNEIKAVYRDCPWGTFWNQTVLTCQDPSVAKCPNDPCV FSRGKIRQYRSKDSCRSYWQCNSHSHLKCCPPGERYEEDQGCVKDNGTCTDACPPRKEEVKVEPVVKEPVDVVGSCDKKP VLNKKRFYDQYVRGHGDIRMPCPPGTEFSPVDCACSIISVYENPRRVKGCQPEIIMDFEDGVRDVSGRMSWINNQGVNTR DGLAVFDGKNRILLPRFNRAEFGSTFIVRLRYKETGEFKGRSAVQALVNNGDCGQEGSIQIYTNNEKVGFVVKTKEEPGM RGMEIPKGTGWKEVEYAVIEGRLEGRVHGVAYTKEAKGDIETRNCALQIGYGFGYHNFVGLMDQIEIYKCKPEKKFSRS |
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