Gene
| Gene Model ID | pfu_aug2.0_422.1_07497 |
|---|---|
| Locus | scaffold422.1 : 189364 ... 255095 : + |
| To GenomeBrowser | scaffold422.1:189364..255095 |
| Genes list of scaffold | scaffold422.1 |
| Synonym | pfu_aug1.0_1641.1_29788 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_422.1_07497.t1 | 5 | 1 | LRR_8 | 212 | 264 | 4.5e-16 | 58.3 | 0.011 | 24.0 | 4.7 |
| pfu_aug2.0_422.1_07497.t1 | 7 | 1 | LRR_4 | 231 | 271 | 1.3e-27 | 94.8 | 5.2e-08 | 0.00011 | 21.7 |
| pfu_aug2.0_422.1_07497.t1 | 5 | 2 | LRR_8 | 231 | 286 | 4.5e-16 | 58.3 | 1.1e-05 | 0.023 | 14.4 |
| pfu_aug2.0_422.1_07497.t1 | 2 | 1 | LRR_9 | 249 | 294 | 6.1e-17 | 61.7 | 5.1e-05 | 0.11 | 12.0 |
| pfu_aug2.0_422.1_07497.t1 | 7 | 2 | LRR_4 | 253 | 294 | 1.3e-27 | 94.8 | 8.7e-12 | 1.8e-08 | 33.7 |
| pfu_aug2.0_422.1_07497.t1 | 7 | 3 | LRR_4 | 274 | 315 | 1.3e-27 | 94.8 | 4.8e-11 | 1.0e-07 | 31.4 |
| pfu_aug2.0_422.1_07497.t1 | 5 | 3 | LRR_8 | 275 | 330 | 4.5e-16 | 58.3 | 1.7e-11 | 3.6e-08 | 33.0 |
| pfu_aug2.0_422.1_07497.t1 | 2 | 2 | LRR_9 | 294 | 436 | 6.1e-17 | 61.7 | 2.7e-17 | 5.7e-14 | 52.0 |
| pfu_aug2.0_422.1_07497.t1 | 7 | 4 | LRR_4 | 297 | 337 | 1.3e-27 | 94.8 | 7.5e-11 | 1.6e-07 | 30.7 |
| pfu_aug2.0_422.1_07497.t1 | 7 | 5 | LRR_4 | 319 | 361 | 1.3e-27 | 94.8 | 5.7e-09 | 1.2e-05 | 24.7 |
| pfu_aug2.0_422.1_07497.t1 | 5 | 4 | LRR_8 | 319 | 374 | 4.5e-16 | 58.3 | 4.6e-12 | 9.8e-09 | 34.8 |
| pfu_aug2.0_422.1_07497.t1 | 7 | 6 | LRR_4 | 341 | 380 | 1.3e-27 | 94.8 | 5.9e-09 | 1.2e-05 | 24.7 |
| pfu_aug2.0_422.1_07497.t1 | 7 | 7 | LRR_4 | 362 | 400 | 1.3e-27 | 94.8 | 4.1e-06 | 0.0086 | 15.6 |
| pfu_aug2.0_422.1_07497.t1 | 5 | 5 | LRR_8 | 382 | 422 | 4.5e-16 | 58.3 | 0.016 | 33.0 | 4.3 |
| pfu_aug2.0_422.1_07497.t1 | 1 | 1 | PHD | 1355 | 1401 | 6.6e-09 | 35.3 | 8.4e-12 | 1.8e-08 | 33.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_422.1_07497.t1 | gi|524867826|ref|XP_005090720.1| | PREDICTED: leucine-rich repeat-containing protein 49-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_422.1_07497.t1 | gi|260821866|ref|XP_002606324.1| | hypothetical protein BRAFLDRAFT_67566 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_422.1_07497.t1 | gi|676421815|ref|XP_009043865.1| | hypothetical protein LOTGIDRAFT_208342 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_422.1_07497.t1 | gi|198435195|ref|XP_002130354.1| | PREDICTED: leucine-rich repeat-containing protein 49 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_422.1_07497.t1 | gi|390364102|ref|XP_001200508.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_422.1_07497.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_422.1_07497.t1 atgtacaacaaaccaagaagcagattgacagctttgaacagagaggaatgtagacctaagcaggtcactccatgtccgtt cgtagagtttgcggagaagaacacggttataccccaggatcaagtggtcttccgtcccacccagatctccaccaccagcg atgtgaccaccatgaaacgatacaatcaaggtcaaggtcaacctgactttactctcaatcacattgcaggccttagacgg ccaaaacaaaaccatggcattcagtcacgtgatatgccagtcgatcctttggagccttttatgcccagcatcgtgtcgtc tgcgatgtgtgtgttgggtacaaacgctagatacttgtcgtctgagaaggtacccatccattaccggggcaacaagaagc agatggtgcccgccccagcttgtgcccatgatctcagtgtcacaccggatattgtacaggatgtggaggcggatacaggg cgtaactcacgctctagctcagatatatcccccaaaacacaaaaggcccctgcatttttaccaggtgacagagtgatatt tgctgagtccccctcagcccctggtatacctgtggtgtacaggacccccgaggaacgatcatcaaacccagacagactta acctagataggcgaaaattgacagtatgtcctatattggaaggagaggaacagctaagacttctgaactatcagcataac ttaataacaaaaatacaacacctgagctcgttaaaacgtctcatcttcctcgatctctatgacaaccaaatagaggaaat atcaggattgtcttccctgaaatctctccgagtcctgatgttgggcaaaaatagaataaagaaaattgagaatttggata atctagtcaaactggatgtgttggatctccatggtaaccagatatcaaccatagagaacctgagtcatttgagtgaatta cgggtgttgaatttggcaggtaaccaaattgtccacgtagataacttagccggcatggattcattggcagagcttaacct taggcgtaaccgcattaaaactgtggttgatgtagataacctacccagtctgcaaaggctcttccttagtttcaatgaaa tatgcagttttgaggacatagcatgcctgggtgactccaccagtctgtctgagatatctctggatggaaaccctatcaca caggaacagtactataaacaagtggtactacgccatatgcagcagctcaaacagctggacatgaaaagggttacggagga agaaagaagaatagctctggtaatggcaagaaaggaagaggagaagaaaagagaaatgaataaagccaatgtactcaaga tgactgtggcccctgtcagtttggtaggtagcactgtctataaagtagaatcactgataatacatacaggccaggtcagc atgtatgacagcatcttaacactgaaattaataaaaatgtcgtcttttctgtccgacattcacatacgactgatgaggaa aatggggaaaaagatcacggcagataaatgggagaagtacatcatgaagtttatccttgataactactcggaggtcgatg catgggaaatagacagatatggctacaagctcagcaaagtgtctacaaaacttacattactcaagacattgatggagagg cagtttgatctgaataagacatttaaggagaagataaacgagaaaactccagaggaattacggtacatgccactgggtag agacaaaaatggactggcatattggtacatgctggacaaggatttaaatctgagagtttacagagaagacctagacgatg tgaatgccgagacttgggaactagtttgcagtaatcgtcaagaattagctactctcattggtcaattagcagatccagtc gaaggaaaaacagaggataaggattcaaactcagaagcttcaggaagtgtaaagaatgaaccaggtgctgtcaaaggtga ggtgtctgaagattcacaggattctgtactgtcaaaagacgttaaaaccgagataaaaacagaagggggttcagaaactc agaaaaatctatcagatactaaacataatgtcaaaaaggaaccagataaagtcgggaaagatgaggttgatggagttggt gataaaaaggcgggaccttcacaaagtattgttaagtgtgaagtgaaagtagaagatattatgaaagtacaagtgaaagt agaacaaaacgacaataatgaagtacaatgcaaagtgaagaaaggagatttagaaactcaggaaaaaactgactcctgtt taacaggagagaaagagagtgaggattctcaatcagttcatagaactaaaggtgaaggagcgtcatcagagctgggtgat tgtgaaagtgcagctccagggaaagataacgataattcaattccaggaaaagataatgataattcaaaagattgtcaggt tgattctaaggaagaaaagaaggaagatgttcaagattcatctgaaaaggaattgtgcaaagactctcataaggaagaga aaaaatcttcagaaagtgttgaggagaaaagtgacgaaaaatctgattcctcagttaaaactacctcatgtgcatcgcat aatgaaaagacggaaaacgttcaaaatgaagatggtgctaagagtaccccaaatttacatgatgtaaaggactccacaag cggagaaaaagcctcaactacttgtgaggatgaagtgggcaaacaagaggatacaccaccaaatgatctcaatgtagttg aaaataagtcaaactctgcaagtgaaacaaagaaaggaaaaataaattcagaaaaagattcagttgaggataataaggaa aatgataaggttagtgaaataaaaatgatacctgctcaaggtaataaggatcttgaagttgagggatcagatacagggaa tttgacacaaaaatctgatgataaagaagttgataaagaacaaagtgcggaacaagactgtaagggagaagaaaacaatg aaagaggtccaaaaatctcaaacgatgagagttgtaaaaacaaagaagaaaaggacacttcaaaaaaggaggtgaaaaat tcttctgatgaaggcaatgttaagaaaactgaaaatgtatcaactgaaaagaaaagtgaacatttaacaactgtaaagaa aagtgaaaatgtaacaaatgagggatctagtaaaagtgacgttgaccaaaataattcctcgaaatatggttctgaggaaa aagacttggaaagtactgaaaagacagtaaatgttaaggagacgaaaaataaagatgtgaaggaatgtaacaatgattct acatctaaaaaaacgcccacgaagaacacaaataagaataagaacagtcggaaaagaggaattcaatacgatgaatcctc agaggattctaaaaagaagttacatagtgatgaggaatacgaagatgagtttctcacgatagccaagtcaaaatctccct tccgacctgtgaaaaagcacggcactagtgacgagggtagccctgccccacagggcaaaatcaagaagctctgtaaaaat agtaaacaaaaggtgctcaagtccaaagacaaaaataacaagagcaaaagctcaagtaagaaactgaaaaataaaagtga tgaaattacgccaaagaaatctaagaaatccaaaagttcggaaatagtgtatagtagtgatgatgaaccgcttgtgaaat cggcaaaaaaatccaagtcgaaaaaagttgtggaatcagaagaggaaaaagagagtgaggttgacgacggaagaagaaga agcgctagggtgaagtctttgagaaagcagaagaaggagccgactccggaattctctagtttggaggaggacgaagtggt agagagtgactttaagttgacatcggaggcggagagcgatgattcagacgatgtggatttctcacctaaggggaggaatg cattaaggcaggctgctagaataaaacaagaggaacaggaggaaattaataatgatactccatgctgcaagtgccttaag tatgacagaccagaatggctgctgttgtgtgacacatgtgatgctggttatcacacagcgtgtctacggccgcccctgtt tgtcataccagagggagattggttctgtccaccctgtgaacataaacaactagtctcaaagctacaggacaacctcagag aacttgatgtacttctgaaaaagcatgatagacttgtgaaaagttacgggaaaatattaaacttaagcactgtggaaagc tcactagtgaaaggtgtgttgttccatcaggacaatgctcctgttcacaagtatgtcactgccattcatgattgtggctt tgatttgattgagcatccgccttattcacctgatcttgctccatcagactttcatctgttcctaaaactgaaagcagcta tttctggcactcactttcagtccgatgataacatcatacttgcagtggatggctttctaaccagtcaagatagggagttc tttaaaagaggtattgaggcccttaaacactggtggcaaaagaaagagaggcttgcatttgttggtatcagtctggacaa cattcttaaagaggaacggaaggaaaatattgaacctgaggaatatgaacaggactacgaaagcaacgaatcagaaagca gtggaagtgatggaagtgaaagtagttctgatcggcggagaaggcggagaagaaaaatctatcataatcatcacagaaaa cttcataaacaatcacaacccaaagaaaattttgtatatgccaaaaggacgtgtcggcagcgaggtgccattagttataa atttgaagactttgacgaaatgataaattccgccattaaggacgaggtggaagaggtcaaagttcacaaagcagaataca aaagaacaaattatggtcgtaacagaggaaaggatatggccaacatatacgaggcggagggacgggaataccatccatct gaagaggaagaggaaacgggtaaacctcctccagtcgtcagtaggaagaaagctcggaaattgacgctgctcgattctga cgatgaaccgcaggacgatgatagcgaggaattccagctcacagatgagacctgttctgagcctccagaggaagaagaag aagatgacgatgatgaagaaatcagcgacttcagcgaggacggggagggctggagatcatgtcgtcggaggtcacagtac ggaaggtcctcaagaaggagttcacgacggagacctggggcaggcagattcaaggattttgttgttgatgatgagtatga tagtgatgactaccggcgatccagaaggaaagccgcaagaaaacgtgtaaactatgacgaaatcctagcggatgaagatg aaacagagttggaagaggaaacagaagaaagtatcgatagttcagatctttgttcagacgatagtgatcacaaaaagaaa cataagaaatccaagaagaagaagaaaaagaaacggaagaaggagaagaggaagaaatctaaacgaagattgaagtctga agatgaatctggggaaagtgagaaagacaatgaagatggaagtaaaagtgatgattcttcgaaaagtgaagttgtgaaaa aagcgcacaaaaggcgtagagaaaagaagaagaaaaaaagacgtgctagtccaagtgacagtgatagtgaatctgacatt gatgaagaaggtgaggaaaaagcagaggacaaggaagagaaagagaagaataaagaagagaatgaggaagctgaacatat tgaggataaaaaggagggagataaagaagaatcagaagagaaacaggaggaagagaacaacgttaatgatcaggtcaaga cggatgtggcagaagagaacagtaaaggggatgagagcaagggcgcttcagaagaacaggcgaatcatgatgttaaagtt gaacacaatgaggactcctcagagaagatggcaatggaggaagattcaactcagcagatgccagttccacagccgattgc cagaccatttcctcaatattcagatggacatttccctcatcagaatatgccccatccagggtatcctccgatgcagggag tgccgtacggacatcctcactacgaacgttttcattcaccgcagcataattatccacctcattctcagcatggatttgct cctggccatcagggcaatccacctcctccacaatatccacagaattatccacagatgccaaatccaccaccacctatggg aaatccacctaacatccgcagccctacaggagatcctaatatgcctcctaacagagaccatgtgaccagtccacctcatt cctcaaagagttctatgtctagtccaccacataacatgtcacaaggtcaaatgtcaagtcctcataatatgtcacagggt caaatgtcagggtcacacaacatgcctcaatcacaaggacaaatgatgccacagtcgggtcagggcatgatccggccccc tcttatgcagcctcatcatatgatgggaggccaaaatccgcccatgggaaactatcctgctaatttccaagggtacccac cacagatgcaaaggccacctaacaaccagcaaggcccaggaccaaatatgggacccatgaggccagggcatcagggcatg atgcaacaagttggaccaggtcaaggcatgatgggccgtcctggaatgccaggccctttgccctaccagcatggacctgg tatgaggccccagggccctcatgatcagatgatgaggccaccaggcaatatgggaatgcatatgagaatgggatatccag ggcaagaacagatgatgcacagaggtcctatgaatcagcatcctcagatgggaagtcagccgtcgtcctcaattcctcat agtcagggtcagtacagtggacctttaacatctttaggacagatggttccccctggagctcagggtccccctggggcccc aggccaaaacatgtcagccgtgaccaatgttaccacttcatcacctagcatgtcagctggagagcatagaggtacctcac catcaaatggaactgttccaggaccaaaagctgctagtaaaaggggcagacctaaaggcagcaagacaaaaagaaaaagg gagagccaatcgatagccccaagtctgatggagggaccacagaaaagccccctgtatcggattcgacctgatgcagcctt catgccttctcgacctcccatgatgaatcacccaggtggtgtcatgaatccagcaatgtcaggccctcccagtttgattc cagattccccagcaaatcacatgcagggagggatggtacctcctccccagggaccaagatacgaaccatacggtatgaac ggaggtccaccaccaccgtccgttacatctccacccccttccatgcagggtggtcctatgcccccagggtcagcagccag tggtgggggtntcgatagccccaagtctgatggagggaccacagaaaagccccctgtatcgggtccacatgccccaccat cacaaccaatgcagtcaccccctccagaaatgatgggctcctatccaagacccccgtttcctcattcaattcccagccag attcgacctgatgcagcctttatgccctctcgacctcccatgatgaatcacccaggtggtgtcatgaatccagcaatgtc aggccctcctagtttgattccagattcctcagcaaatcacatgcagggagggatggtacctcctccccagggaccaagat acgaaccatacggtatgaacggaggtccaccaccaccgtccgttacatctccacccccttccatgcagggtggtcctatg cccccagggtcagcagccagtggtgggggtgggggaggaagaggtttcatgattgataatctattagagaagcctcaaaa gtcgatctcacctgtggattatcagggccgtaatgaagtggcgacacctagcgagcagtcagaggatagtcaggagatga gtcacctggagaggatagaatacacgtctatagcatttcaagaagaggaaggtgaaggaatgtctgacattgctgatatt gtcaaaaattacccttccgattgcgggaaaaaaatgcaaaatttcgtgacgtcacaatgcttttaccatgtgtttacctc ggacaaacaagcttcgaacctcggtcaaacatcgaaattgcattgtgacgtcatggaatttcccgtgttcggaatggtca ataacgtatttgtgtga |
|
Protein
| Protein ID | pfu_aug2.0_422.1_07497.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_422.1_07497.t1 MYNKPRSRLTALNREECRPKQVTPCPFVEFAEKNTVIPQDQVVFRPTQISTTSDVTTMKRYNQGQGQPDFTLNHIAGLRR PKQNHGIQSRDMPVDPLEPFMPSIVSSAMCVLGTNARYLSSEKVPIHYRGNKKQMVPAPACAHDLSVTPDIVQDVEADTG RNSRSSSDISPKTQKAPAFLPGDRVIFAESPSAPGIPVVYRTPEERSSNPDRLNLDRRKLTVCPILEGEEQLRLLNYQHN LITKIQHLSSLKRLIFLDLYDNQIEEISGLSSLKSLRVLMLGKNRIKKIENLDNLVKLDVLDLHGNQISTIENLSHLSEL RVLNLAGNQIVHVDNLAGMDSLAELNLRRNRIKTVVDVDNLPSLQRLFLSFNEICSFEDIACLGDSTSLSEISLDGNPIT QEQYYKQVVLRHMQQLKQLDMKRVTEEERRIALVMARKEEEKKREMNKANVLKMTVAPVSLVGSTVYKVESLIIHTGQVS MYDSILTLKLIKMSSFLSDIHIRLMRKMGKKITADKWEKYIMKFILDNYSEVDAWEIDRYGYKLSKVSTKLTLLKTLMER QFDLNKTFKEKINEKTPEELRYMPLGRDKNGLAYWYMLDKDLNLRVYREDLDDVNAETWELVCSNRQELATLIGQLADPV EGKTEDKDSNSEASGSVKNEPGAVKGEVSEDSQDSVLSKDVKTEIKTEGGSETQKNLSDTKHNVKKEPDKVGKDEVDGVG DKKAGPSQSIVKCEVKVEDIMKVQVKVEQNDNNEVQCKVKKGDLETQEKTDSCLTGEKESEDSQSVHRTKGEGASSELGD CESAAPGKDNDNSIPGKDNDNSKDCQVDSKEEKKEDVQDSSEKELCKDSHKEEKKSSESVEEKSDEKSDSSVKTTSCASH NEKTENVQNEDGAKSTPNLHDVKDSTSGEKASTTCEDEVGKQEDTPPNDLNVVENKSNSASETKKGKINSEKDSVEDNKE NDKVSEIKMIPAQGNKDLEVEGSDTGNLTQKSDDKEVDKEQSAEQDCKGEENNERGPKISNDESCKNKEEKDTSKKEVKN SSDEGNVKKTENVSTEKKSEHLTTVKKSENVTNEGSSKSDVDQNNSSKYGSEEKDLESTEKTVNVKETKNKDVKECNNDS TSKKTPTKNTNKNKNSRKRGIQYDESSEDSKKKLHSDEEYEDEFLTIAKSKSPFRPVKKHGTSDEGSPAPQGKIKKLCKN SKQKVLKSKDKNNKSKSSSKKLKNKSDEITPKKSKKSKSSEIVYSSDDEPLVKSAKKSKSKKVVESEEEKESEVDDGRRR SARVKSLRKQKKEPTPEFSSLEEDEVVESDFKLTSEAESDDSDDVDFSPKGRNALRQAARIKQEEQEEINNDTPCCKCLK YDRPEWLLLCDTCDAGYHTACLRPPLFVIPEGDWFCPPCEHKQLVSKLQDNLRELDVLLKKHDRLVKSYGKILNLSTVES SLVKGVLFHQDNAPVHKYVTAIHDCGFDLIEHPPYSPDLAPSDFHLFLKLKAAISGTHFQSDDNIILAVDGFLTSQDREF FKRGIEALKHWWQKKERLAFVGISLDNILKEERKENIEPEEYEQDYESNESESSGSDGSESSSDRRRRRRRKIYHNHHRK LHKQSQPKENFVYAKRTCRQRGAISYKFEDFDEMINSAIKDEVEEVKVHKAEYKRTNYGRNRGKDMANIYEAEGREYHPS EEEEETGKPPPVVSRKKARKLTLLDSDDEPQDDDSEEFQLTDETCSEPPEEEEEDDDDEEISDFSEDGEGWRSCRRRSQY GRSSRRSSRRRPGAGRFKDFVVDDEYDSDDYRRSRRKAARKRVNYDEILADEDETELEEETEESIDSSDLCSDDSDHKKK HKKSKKKKKKKRKKEKRKKSKRRLKSEDESGESEKDNEDGSKSDDSSKSEVVKKAHKRRREKKKKKRRASPSDSDSESDI DEEGEEKAEDKEEKEKNKEENEEAEHIEDKKEGDKEESEEKQEEENNVNDQVKTDVAEENSKGDESKGASEEQANHDVKV EHNEDSSEKMAMEEDSTQQMPVPQPIARPFPQYSDGHFPHQNMPHPGYPPMQGVPYGHPHYERFHSPQHNYPPHSQHGFA PGHQGNPPPPQYPQNYPQMPNPPPPMGNPPNIRSPTGDPNMPPNRDHVTSPPHSSKSSMSSPPHNMSQGQMSSPHNMSQG QMSGSHNMPQSQGQMMPQSGQGMIRPPLMQPHHMMGGQNPPMGNYPANFQGYPPQMQRPPNNQQGPGPNMGPMRPGHQGM MQQVGPGQGMMGRPGMPGPLPYQHGPGMRPQGPHDQMMRPPGNMGMHMRMGYPGQEQMMHRGPMNQHPQMGSQPSSSIPH SQGQYSGPLTSLGQMVPPGAQGPPGAPGQNMSAVTNVTTSSPSMSAGEHRGTSPSNGTVPGPKAASKRGRPKGSKTKRKR ESQSIAPSLMEGPQKSPLYRIRPDAAFMPSRPPMMNHPGGVMNPAMSGPPSLIPDSPANHMQGGMVPPPQGPRYEPYGMN GGPPPPSVTSPPPSMQGGPMPPGSAASGGGXDSPKSDGGTTEKPPVSGPHAPPSQPMQSPPPEMMGSYPRPPFPHSIPSQ IRPDAAFMPSRPPMMNHPGGVMNPAMSGPPSLIPDSSANHMQGGMVPPPQGPRYEPYGMNGGPPPPSVTSPPPSMQGGPM PPGSAASGGGGGGRGFMIDNLLEKPQKSISPVDYQGRNEVATPSEQSEDSQEMSHLERIEYTSIAFQEEEGEGMSDIADI VKNYPSDCGKKMQNFVTSQCFYHVFTSDKQASNLGQTSKLHCDVMEFPVFGMVNNVFV |
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