Gene
| Gene Model ID | pfu_aug2.0_422.1_07499 |
|---|---|
| Locus | scaffold422.1 : 294813 ... 309833 : - |
| To GenomeBrowser | scaffold422.1:294813..309833 |
| Genes list of scaffold | scaffold422.1 |
| Synonym | pfu_aug1.0_17295.1_32792 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tetraspanin-7 | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_422.1_07499.t1 | 1 | 1 | Tetraspannin | 18 | 248 | 0.0 | 183.4 | 0.0 | 0.0 | 182.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_422.1_07499.t1 | gi|676463243|ref|XP_009056534.1| | hypothetical protein LOTGIDRAFT_204033 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_422.1_07499.t1 | gi|524902275|ref|XP_005107456.1| | PREDICTED: tetraspanin-7-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_422.1_07499.t1 | gi|260817256|ref|XP_002603503.1| | hypothetical protein BRAFLDRAFT_265104 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_422.1_07499.t1 | gi|642924607|ref|XP_974699.3| | PREDICTED: tetraspanin-7-like [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_422.1_07499.t1 | gi|675870488|ref|XP_009020804.1| | hypothetical protein HELRODRAFT_185730 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_422.1_07499.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_422.1_07499.t1 atggacaagggacacgctaaatcactcgctgccactgccccagctgtagcctgtatgaagttaatgttgatgatatttaa ttttgtattttgggtaacaggtatagctatccttgcaataggaatatggaccaaagtggacctatacaagtatatggaat tatcgtcaatttactacaaggaatctccgtacgtcctgattggagtgggtgccgtcattgttgtggttggctcactggga tgttgctgtacgatgaaaggaaattcctgtcttctgtatatgtatgcaggtttcctggtgattgtgtttgtagctgaact gagtgctggatgtactggattcatctacaaaggaaagcttgagaagggattcaaggaaggtttaaccaatgccatcaaga agtatggtagtaatgatgacatcactgttgccatggacaacatgcagaaacagttgcactgttgcggtaactcggcctat acagactggtttaactctacctgggggagtggtaagaattactctgtgccggaatcctgctgccgatcagacgtctcgac cgtttgtcagaatgtcaacgttaaaaccgtgggatataacgccagtatctacactgagggctgtgccccgacagtgattg acttcatgcaggccaagatggggatgataggaggtgtggccctggggatatccttcttccaactgtttggtgccctcctg gcctgctgtctagcaaagaacatcaacaggtccaagtatgaacaagtggcctag |
|
Protein
| Protein ID | pfu_aug2.0_422.1_07499.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_422.1_07499.t1 MDKGHAKSLAATAPAVACMKLMLMIFNFVFWVTGIAILAIGIWTKVDLYKYMELSSIYYKESPYVLIGVGAVIVVVGSLG CCCTMKGNSCLLYMYAGFLVIVFVAELSAGCTGFIYKGKLEKGFKEGLTNAIKKYGSNDDITVAMDNMQKQLHCCGNSAY TDWFNSTWGSGKNYSVPESCCRSDVSTVCQNVNVKTVGYNASIYTEGCAPTVIDFMQAKMGMIGGVALGISFFQLFGALL ACCLAKNINRSKYEQVA |
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