Gene
| Gene Model ID | pfu_aug2.0_4232.1_09299 |
|---|---|
| Locus | scaffold4232.1 : 27496 ... 33368 : + |
| To GenomeBrowser | scaffold4232.1:27496..33368 |
| Genes list of scaffold | scaffold4232.1 |
| Synonym | pfu_aug1.0_15816.1_18270 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4232.1_09299.t1 | 2 | 1 | HSP70 | 144 | 364 | 1.9e-08 | 32.7 | 3.9e-12 | 1.9e-08 | 32.7 |
| pfu_aug2.0_4232.1_09299.t1 | 2 | 2 | HSP70 | 515 | 529 | 1.9e-08 | 32.7 | 0.42 | 2100.0 | -3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4232.1_09299.t1 | gi|499043923|ref|XP_004572562.1| | PREDICTED: heat shock 70 kDa protein 12A isoform X4 [Maylandia zebra] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4232.1_09299.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4232.1_09299.t1 atggcaactggtccacctccaaagccgtccacatgttcaagacttttcgttgctgccatagattttggaacgacctattc aggttatgcgttctcatcgaaggcagaatggatgaaagtgcagacaaatgtatggacaggatcaaaccagatgtcggcta aaacacccactgcattactgctgaatccaaacaaatcattcaattcgtttggttatgatgcagaaaataagttcacagag cttgcagaggaaggagacgatcatatggagtattattatttccataggttcaaaatgttactacacaactgcaaagcagg tatcaatgccaatgcattatccatagccctggaacctgaagcagcctcaatatactgccagcatataccaacagaaatac aatttgacggtaattcatcgttcttacgcaaagcaaaatcgggcaccaaatatgtcatcatggatcttggaggcggcaca gccgatataactgtccatctgcgctcaggggagggaactttggatgaggtacgaccagcaagtggcggcccatggggtgg aaaatcagtcgatgataacttctgcaaatttcttacaaaagttgtaggggaaaaagtcatggaaaaacttaggactgaaa acatggaagattacttagacttgtttcgtgaattcgaaagcaaaaaacgctgtattcaaagttgttccttgggaaaagtg catatgaaaattccattggctcttcaaagcttgacaaaaaagcaaatgagtaaaacactagtagatgcattgaaggagtc agatttctctgacacagtacattttgcaaacatgaaaatccacatgtcagctgagacatttaaagagctgtttgttccaa cggcagagtcaatcgttaatcatttgaaagaagtgtttgaggacaaaaatgcaaaagacgtaaaaatgattttaatggta gggggattttcagaatgtgagttagtacaagctgcagtaaaggaaaattttccggaaaaaaagattatcattccagagga tcctggacttgctgtgttgaagggagcggtatattttggtcatgtgccaagcactataggcagacgtgtagctcgattct catatggcatccaaagttggcccgagtttgactacaggaaacacccagaagaaaaacgagttatgatcaaccaggttccc cgatgtcgggatgtattcttcaggtacgtggccaagggagaactgctagtgccaggctatagaagatcacagatattcca agcccttaaaccagaagagagctgtttggagtgcgctatatacatttccgacaatgtagaaccacgcttcattgacgaag agaattgcagacgtcttggtattttaagaattccgctacctaccattcatcgaggggcccatcttgaagtggaggagaca atgatttttggcgagacagagcttcgtgttcaggctcgtgacatttacaccaatcagcttgtagagactgtccttaatct cctaggtgacgactcccaacaggatcagaaccaggaacaggaacaagaacaggagcaggaacaggaacatagtgatcatc acgatagtcactctgatagtgattccgatagttaa |
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Protein
| Protein ID | pfu_aug2.0_4232.1_09299.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4232.1_09299.t1 MATGPPPKPSTCSRLFVAAIDFGTTYSGYAFSSKAEWMKVQTNVWTGSNQMSAKTPTALLLNPNKSFNSFGYDAENKFTE LAEEGDDHMEYYYFHRFKMLLHNCKAGINANALSIALEPEAASIYCQHIPTEIQFDGNSSFLRKAKSGTKYVIMDLGGGT ADITVHLRSGEGTLDEVRPASGGPWGGKSVDDNFCKFLTKVVGEKVMEKLRTENMEDYLDLFREFESKKRCIQSCSLGKV HMKIPLALQSLTKKQMSKTLVDALKESDFSDTVHFANMKIHMSAETFKELFVPTAESIVNHLKEVFEDKNAKDVKMILMV GGFSECELVQAAVKENFPEKKIIIPEDPGLAVLKGAVYFGHVPSTIGRRVARFSYGIQSWPEFDYRKHPEEKRVMINQVP RCRDVFFRYVAKGELLVPGYRRSQIFQALKPEESCLECAIYISDNVEPRFIDEENCRRLGILRIPLPTIHRGAHLEVEET MIFGETELRVQARDIYTNQLVETVLNLLGDDSQQDQNQEQEQEQEQEQEHSDHHDSHSDSDSDS |
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