Gene
| Gene Model ID | pfu_aug2.0_424.1_14136 |
|---|---|
| Locus | scaffold424.1 : 72036 ... 76941 : + |
| To GenomeBrowser | scaffold424.1:72036..76941 |
| Genes list of scaffold | scaffold424.1 |
| Synonym | pfu_aug1.0_5252.1_52496 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_424.1_14136.t1 | 2 | 1 | SH3_3 | 11 | 65 | 7.7e-07 | 29.2 | 4.5e-10 | 2.2e-06 | 27.7 |
| pfu_aug2.0_424.1_14136.t1 | 1 | 1 | Amidase_2 | 111 | 239 | 2.3e-21 | 76.2 | 6.6e-25 | 3.2e-21 | 75.7 |
| pfu_aug2.0_424.1_14136.t1 | 2 | 2 | SH3_3 | 147 | 167 | 7.7e-07 | 29.2 | 0.99 | 4900.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_424.1_14136.t1 | gi|676488687|ref|XP_009064695.1| | hypothetical protein LOTGIDRAFT_168576 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_424.1_14136.t1 | gi|676495283|ref|XP_009066839.1| | hypothetical protein LOTGIDRAFT_134508, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_424.1_14136.t1 | gi|676445851|ref|XP_009050887.1| | hypothetical protein LOTGIDRAFT_114633 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_424.1_14136.t1 | gi|524873497|ref|XP_005093494.1| | PREDICTED: peptidoglycan recognition protein 1-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_424.1_14136.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_424.1_14136.t1 atggctgaagagtgtgcgtgtgcacttgccgatgtaaacattcgttcaggagcaggtgtttctcatagtgttttatcagt tcttctgaaaagccactgtctgaagttcaagggtcatctgtcatcaataggaacgacacattgggcaaatgttgactaca atggacagaatggctggatctcaggagactatcttcactttcataattgttccttgggaaatccacatataactaatcct gcaggtccaagctcccctggctgtcctaccataataagtagaagtgaatggggtgctcgggctccttcatcgatcatagg aatactaccgaaagctccaaatcacgtgtatatccatcatggcgcaaccgcgccttgtttttcgaaaactgaatgtatgg cagaagtcaggacatatcaaaactaccacatggacactcatggatggtctgacattggttatagtttcatcataggagaa gatggcaatgtctatgaaggcagagggtggcatgggattggcgctcatacatatggacacaatgttgatggcctaggttt ttgtatcattggcaacttcatgaaagtaaaaccaaacgaggcagcactgaatgcaaccaagcagcttatctcttgtgccg taactaatggttacataacagaagactatatactaaaaggacaccgtgacgtgggacagacagcttgtcccggagataag ctgtacgagctgattcagaaatggccacattatccacattag |
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Protein
| Protein ID | pfu_aug2.0_424.1_14136.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_424.1_14136.t1 MAEECACALADVNIRSGAGVSHSVLSVLLKSHCLKFKGHLSSIGTTHWANVDYNGQNGWISGDYLHFHNCSLGNPHITNP AGPSSPGCPTIISRSEWGARAPSSIIGILPKAPNHVYIHHGATAPCFSKTECMAEVRTYQNYHMDTHGWSDIGYSFIIGE DGNVYEGRGWHGIGAHTYGHNVDGLGFCIIGNFMKVKPNEAALNATKQLISCAVTNGYITEDYILKGHRDVGQTACPGDK LYELIQKWPHYPH |
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