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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_424.1_14143
Locus scaffold424.1 : 168115 ... 194662 : +
To GenomeBrowser scaffold424.1:168115..194662
Genes list of scaffold scaffold424.1
Synonym pfu_aug1.0_111912.1_21010

Manual annotation
Annotation by Blast2GO
Annotation GO
serine threonine-protein kinase 17a GO:0004674 GO:0005524 GO:0005634 GO:0006468 GO:0035556 GO:2000271 GO:2000377

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_424.1_14143.t1 1 1 Pkinase 36 296 0.0 224.3 0.0 0.0 223.8
pfu_aug2.0_424.1_14143.t1 1 1 Pkinase_Tyr 38 291 5.3e-35 120.7 2.4e-38 7.3e-35 120.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_424.1_14143.t1 gi|524910117|ref|XP_005109941.1| PREDICTED: serine/threonine-protein kinase 17A-like, partial [Aplysia californica] 0.0
pfu_aug2.0_424.1_14143.t1 gi|676427640|ref|XP_009045013.1| hypothetical protein LOTGIDRAFT_53984, partial [Lottia gigantea] 0.0
pfu_aug2.0_424.1_14143.t1 gi|297680575|ref|XP_002818063.1| PREDICTED: serine/threonine-protein kinase 17A [Pongo abelii] 0.0
pfu_aug2.0_424.1_14143.t1 gi|332239363|ref|XP_003268873.1| PREDICTED: serine/threonine-protein kinase 17A [Nomascus leucogenys] 0.0
pfu_aug2.0_424.1_14143.t1 gi|109255245|ref|NP_004751.2| serine/threonine-protein kinase 17A [Homo sapiens] 0.0

Transcript
Transcript IDpfu_aug2.0_424.1_14143.t1
Definition-
>pfu_aug2.0_424.1_14143.t1
atgaatggccttcacaatcactatcataacagtgtatcgggattggtctcggatgctaagtacaaacctaatacggcaat
acgcacggaacagctgacgcagaagtactgtatagagaaggacataggaagaggaaaatttgctgtggtgaagaaatgtg
tcaacaaagagtctggagaagaagtggcggccaaatttattcggaaaagacgaaaagggaagacatgccgggatgaaata
ttacgggaagttgtaatgctggagatggcgctagagcatccacggctggtagatctgaaggaggtgtatgaatcacagtc
agagcttatactcgtcactgagtattgttctggcggagagttgttcacagagtgtgtgatcgaggaatcgttcaaggaga
aggagacggaggctgttagattgatgaggcagatactagagggactcgtatacttacacgaacgacaaatagtacatcta
gaccttaagccacaaaacattcttctgaccaagccatttccagaaggtaatataaagatctgtgacttgggatttgcctg
tctcgttaacacgggggaagatatacgagatatcataggaaccccagactatgtcgccccagaagtgctatcatatgaac
cactaggtctctatacagacatgtggagtttaggagtgctaacttatgtgatgttgactgcccactcgccatttgtaggg
gcagataaccaagaaacttttctcaacatatcccaggtcaacttagatttcccagaatgcctctttcaagatgtcagtgc
tgctgctcaggatttcattggcaaacttctcattaaggatccagaggatcggctaacggctcaccagtgtttagatcatc
cttggattagtggagttgtcaatcctgaaaaacttcttgaagacgtaaacgatgaaaatatttctgacgataataaatcg
aaaaacgtaacatcagtttgtgtaatcgacacaggaagtggtaaccatagtaacaatgatggtggaagtaataacatgga
catggtggaaaaggcggaaggggacaatgacgaaatgaaagtagaatatgaaagtgagtcatgtgacattattatcaaaa
ataaaggagagcatatagagtgctttagtgaaaaagagcaatttatattacagaacaagagtgatttatccgaaaatgtg
caaaacgtttacatctcaacaaagacccattcgtctacaaatatagattttgacgttactccgagtaaaattccaaggtg
caatgatgaaaatatgactccaagcaaagatgttatgaatttgattcaccatctgcattttcatctggctaccataatgt
tttatacctttgttaatatcttacctgaaaacaatgaaatgacaatgagatga

Protein
Protein IDpfu_aug2.0_424.1_14143.t1
Definition-
>pfu_aug2.0_424.1_14143.t1
MNGLHNHYHNSVSGLVSDAKYKPNTAIRTEQLTQKYCIEKDIGRGKFAVVKKCVNKESGEEVAAKFIRKRRKGKTCRDEI
LREVVMLEMALEHPRLVDLKEVYESQSELILVTEYCSGGELFTECVIEESFKEKETEAVRLMRQILEGLVYLHERQIVHL
DLKPQNILLTKPFPEGNIKICDLGFACLVNTGEDIRDIIGTPDYVAPEVLSYEPLGLYTDMWSLGVLTYVMLTAHSPFVG
ADNQETFLNISQVNLDFPECLFQDVSAAAQDFIGKLLIKDPEDRLTAHQCLDHPWISGVVNPEKLLEDVNDENISDDNKS
KNVTSVCVIDTGSGNHSNNDGGSNNMDMVEKAEGDNDEMKVEYESESCDIIIKNKGEHIECFSEKEQFILQNKSDLSENV
QNVYISTKTHSSTNIDFDVTPSKIPRCNDENMTPSKDVMNLIHHLHFHLATIMFYTFVNILPENNEMTMR

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