Gene
| Gene Model ID | pfu_aug2.0_424.1_14145 |
|---|---|
| Locus | scaffold424.1 : 218222 ... 263274 : - |
| To GenomeBrowser | scaffold424.1:218222..263274 |
| Genes list of scaffold | scaffold424.1 |
| Synonym | pfu_aug1.0_23468.1_18937 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| d-3-phosphoglycerate dehydrogenase-like | GO:0016616 GO:0044710 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_424.1_14145.t1 | 3 | 1 | F5_F8_type_C | 100 | 224 | 1.2e-17 | 63.9 | 7.7e-11 | 2.9e-07 | 30.3 |
| pfu_aug2.0_424.1_14145.t1 | 3 | 2 | F5_F8_type_C | 253 | 379 | 1.2e-17 | 63.9 | 7.0e-11 | 2.6e-07 | 30.5 |
| pfu_aug2.0_424.1_14145.t1 | 3 | 3 | F5_F8_type_C | 404 | 429 | 1.2e-17 | 63.9 | 0.83 | 3100.0 | -2.1 |
| pfu_aug2.0_424.1_14145.t1 | 1 | 1 | 2-Hacid_dh | 454 | 758 | 1.5e-38 | 131.2 | 6.89999e-42 | 2.6e-38 | 130.5 |
| pfu_aug2.0_424.1_14145.t1 | 1 | 1 | 2-Hacid_dh_C | 557 | 731 | 0.0 | 189.1 | 0.0 | 0.0 | 188.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_424.1_14145.t1 | gi|676438247|ref|XP_009048467.1| | hypothetical protein LOTGIDRAFT_200644 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_424.1_14145.t1 | gi|524867792|ref|XP_005090703.1| | PREDICTED: d-3-phosphoglycerate dehydrogenase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_424.1_14145.t1 | gi|390367499|ref|XP_795649.3| | PREDICTED: D-3-phosphoglycerate dehydrogenase [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_424.1_14145.t1 | gi|573897705|ref|XP_006636588.1| | PREDICTED: d-3-phosphoglycerate dehydrogenase-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_424.1_14145.t1 | gi|585695994|ref|XP_006822129.1| | PREDICTED: d-3-phosphoglycerate dehydrogenase-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_424.1_14145.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_424.1_14145.t1 atgttcaagatttatcagccttttatacgtagatatgatcctactatcaacagacggacactcagcacgttcagcatgaa caatcaacagccttgtaccagtgcattcttaagctttgtattgggaatgactgtgacgactggactccatggcgtaccca gcccaaacatcttaagagaaggcaggatcctaccacctgtcctccctgaatgtatgtcggactcctcggttgatgagttc gctacagcagaacgtaaatcccaaaacttggcagacgaattcaatcaagcaatcggaagctccgtatacagcaataaccc tattcattaccccgcctatgctgtagatggttatctgtcacctcgtgtttggggcgaggaatgcttcacttcaagtatag aattatcgccatggatacagatagatttacaaacaataagcgatatagatttcttgaagatcttcaacagatgggatgaa ctaggtagcaggttacacgacatcaagatccaaatagatgatgtaggtggtaaatgtgatgattatgtaggaccggccgc tgattcacaagttgtgtttattccatgtctaccggccactagaggacgacatgttaaagtgtatatagacggtgcccctg gggaaaacaatattctcaccatctctgaactagaaattctgttgatggatgattatcttcaccatttgatacttacagaa caaagatcccataatgtagccaataacaagccagcacgcggaagttccgtgtggaaaaataacagctttcaatttccaga gttagctgttgatggtctcctttcttctcgaagctggggtgaagaatgtttccattctgacttcgaagtatctccatgga tactggtagatttacaaacaataaattatatagattacctgaaaatttacaacaggtgggatagagtaggtgacaggtta cataatatcaagatacaaattgatgatgtagatgataaatgtgatgattatttaggacctgctgctaactcacaagttgt gtttgttccatgtctaccggctactagaggacgtcatgttaaagtgtatatagacggcgcccaaggggaaaacaatattc tcaccatctctgaattagaaattcgtgacagattacatgatatcaagatacaaattgatgatgtagatgataaatgtgat gattatttaggaccggctgctgactcacaagttgtgtttgttccatgtcttccggtcactagaggacgtcatgttaaggt gcactcgagcgtgacgtcctaccggcgaatagaagtaaatcaagagagggaagaaaatatggcattttctttaaaatcag tattaatttcagatgaaattgaccagaaatgtgtggacattttgcagtcgaatggagtgcaagttacaaagaatacaaaa ctttcaaaagaagaacttgtgcaagaaatagcgaaatatgatggtttggttgtgcgttccgctaccaaagttactgctga tgtcatcaacgcagctaagaacttgaagatcattggtcgagctggaacgggagtggacaacattgattgtgatgctgcta ctaaaaaaggcattattgtaatgaacacacctggaggcaatactttaagtgcagctgaacttacctgtgcactcatctgt ggattgtccagaaatattcacaatggagacagggctatgaagacagagacttggtcagaaaggaagaaactaatggggaa tgaactatatggtaaaacactggcaatagtagggctaggtaggatagggaaggaggtggcaatcaggatgcagtcttttg gaatgaagaccataggctttgatccgatcataccgggagaagtcagtgcagaatttggggtggagtggatggagttagac aggttatggccccttgctgattacatcacagtacatactcccttgattcctcagactaagaatctcatcagcgacaaggt attctcaacctgtaaaaaaggtatacgtgtagtaaacgtagctcgtggtggtataatagacgaggaggccttactccgag cattaaaatctggacaatgtgccggggcagggttggatgtattcacctctgagcctcccaaggatttcaccctagccaaa caccctaaagttctagccactcctcacctaggggccagtactgtggaagcccaggaaagggttgctgtagaaatagccga gcagttcgtagatctcatgaaagggacacaactctttggagctattaatgcccaggccatgtgtagtgcactagcaccag aaactcagccatgggttgaccttgggcagaggttaggtgctgtttccatggcaacaaataaaggccaatcatctaagaaa gttgcagtcggtacctatggtcagtcattaaagaaggcatcatatgtaagtgctgctgcactggcaggattattgaagaa ttcagctgcgggaggcgactcagcaacacttaatctcgttagtgccccagctctagctaaacaattaggagtagaggtga caactcagcacaacgactccgcaccctcaccgtacacggcatgtataagtgtaacacttgacaatggaattcaggttaca gggacgtgcggtggtggagcccccttactgactgcggttcaaggtcaaggtttccaagcacctgcccccctcacagacaa catggtggtgtttactgccaaggggagtcctcaactactacaaaatgctctgggtgctgtaacacaagctggagccactg catgcagcgtgtcgctaacgttggagaaggatagtaaagtttggggagttatttcccttctacaaaaagctccggccaat tgtctggacgcactgtctaaggttacagaggcagcttatcttgtttaa |
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Protein
| Protein ID | pfu_aug2.0_424.1_14145.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_424.1_14145.t1 MFKIYQPFIRRYDPTINRRTLSTFSMNNQQPCTSAFLSFVLGMTVTTGLHGVPSPNILREGRILPPVLPECMSDSSVDEF ATAERKSQNLADEFNQAIGSSVYSNNPIHYPAYAVDGYLSPRVWGEECFTSSIELSPWIQIDLQTISDIDFLKIFNRWDE LGSRLHDIKIQIDDVGGKCDDYVGPAADSQVVFIPCLPATRGRHVKVYIDGAPGENNILTISELEILLMDDYLHHLILTE QRSHNVANNKPARGSSVWKNNSFQFPELAVDGLLSSRSWGEECFHSDFEVSPWILVDLQTINYIDYLKIYNRWDRVGDRL HNIKIQIDDVDDKCDDYLGPAANSQVVFVPCLPATRGRHVKVYIDGAQGENNILTISELEIRDRLHDIKIQIDDVDDKCD DYLGPAADSQVVFVPCLPVTRGRHVKVHSSVTSYRRIEVNQEREENMAFSLKSVLISDEIDQKCVDILQSNGVQVTKNTK LSKEELVQEIAKYDGLVVRSATKVTADVINAAKNLKIIGRAGTGVDNIDCDAATKKGIIVMNTPGGNTLSAAELTCALIC GLSRNIHNGDRAMKTETWSERKKLMGNELYGKTLAIVGLGRIGKEVAIRMQSFGMKTIGFDPIIPGEVSAEFGVEWMELD RLWPLADYITVHTPLIPQTKNLISDKVFSTCKKGIRVVNVARGGIIDEEALLRALKSGQCAGAGLDVFTSEPPKDFTLAK HPKVLATPHLGASTVEAQERVAVEIAEQFVDLMKGTQLFGAINAQAMCSALAPETQPWVDLGQRLGAVSMATNKGQSSKK VAVGTYGQSLKKASYVSAAALAGLLKNSAAGGDSATLNLVSAPALAKQLGVEVTTQHNDSAPSPYTACISVTLDNGIQVT GTCGGGAPLLTAVQGQGFQAPAPLTDNMVVFTAKGSPQLLQNALGAVTQAGATACSVSLTLEKDSKVWGVISLLQKAPAN CLDALSKVTEAAYLV |
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