Gene
| Gene Model ID | pfu_aug2.0_4240.1_02590 |
|---|---|
| Locus | scaffold4240.1 : 17035 ... 44894 : - |
| To GenomeBrowser | scaffold4240.1:17035..44894 |
| Genes list of scaffold | scaffold4240.1 |
| Synonym | pfu_aug1.0_8874.1_02663 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna replication atp-dependent helicase nuclease dna2 | GO:0006260 GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4240.1_02590.t1 | 2 | 1 | Dna2 | 213 | 270 | 0.0 | 208.1 | 0.71 | 5300.0 | -3.6 |
| pfu_aug2.0_4240.1_02590.t1 | 2 | 2 | Dna2 | 644 | 845 | 0.0 | 208.1 | 0.0 | 0.0 | 208.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4240.1_02590.t1 | gi|701382573|ref|XP_009988366.1| | PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2, partial [Tauraco erythrolophus] | 0.0 |
| pfu_aug2.0_4240.1_02590.t1 | gi|514704061|ref|XP_005009164.1| | PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_4240.1_02590.t1 | gi|697000912|ref|XP_009566487.1| | PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2 [Cuculus canorus] | 0.0 |
| pfu_aug2.0_4240.1_02590.t1 | gi|557327946|ref|XP_006036914.1| | PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2 [Alligator sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4240.1_02590.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4240.1_02590.t1 caggaggaagggcagaagaaaatatccagtttctttcagaaaggcggtacaaaaccagtttctagttctctttttaccac tactggaaactctaacagtaatggcggatccaaactgacgctgaagaaacccactaatggtaaaactaggtacacagaaa ctaaagagagggacaaagacagcggctgtaaacaggtgaatagcgggaaaaatgcagatgttcaagcaggtgactcaaga tcagaacctattgtgatcccagaaactcagtgctttaagagtcctcttcatcctagaccctgtgacaaaagtgtcaatga ggaccttaacgacagtattataattcccggaactcctgaggagacgaataaaatagatggagtgaaaggaaggaagtgtt tttccagaagctttctgacctctgcttccagtgttacgcaaagaccggggaagcatgtagctaaagaacagttgaagaaa gtttcacaggcaagaaaaagtttactgtcggtttctgtgaagttcgaccaaagtagtgtgaaagatgagatgaatcaagg tagtgagaaaggtataaatggaaaccaagggaagtcttgtctacaaggagaacagccagtgatggaaagtgaaaacatcc cacacactttgttcgcaaacttagagggaaataatgaaagtcagtctgtcattgaaaacatggaatcgtctgaggtaata gaaagcgagaaaaatggaataactcgccaaagcgaaggtcattcggcttcaaatagtgatatccgttctttgatgattaa gaaatatgaagaaaagttttctgatgaaaaagagaatatagaacttgaaaaagcaacacctacaaaaatttatgatggta aatgtatgaaaagaatgtcaaagactggcacgtccccaaatagcaagagaagtctgagtacggattgtaaaaaccttgaa atggaaaaagatggcaatgacagtgactcgtctggattcgaactttcttttgacgaagatgataaggaagaaactgtgaa taaaaataagaaaaagatggatgaagtggaaggcgctagacgtagtcttaaggaatttgaaaagaaaacgaggaaaacaa aaataagaccgaatgcttcggcggtgaataattatcagttgatgatgcatagacctaatgttagaaaaagtgtcgttgag acaaaagacgatgaactattgagtgaattactgggggagattaacacttcgacaaatcggggatctgcggagaaaaggcc aggtgcaatgaataggcgaaaatccttgaataaaacaaagtatgtaggtgatgtgaaaactgacctttctgttggaatta cggatgatgaaaagaaatattttgagtgcttagatacagaaattcataatgacatgacgcaacttgataaaaatgataca aaatcgagtatcggtaccgtcttgcctactaagcctgtgatattgaaaaagtgtttcaaaaataaatctccgaaatttga taagacaaattcagttgcaagtgtgagttcgtcagatataaagaagaatgttcagaaacattcagatatgcgtttaaatg acacagaggattctgaaatagacgattcagtaacgcagaattcaaattccgataaaggtgtagtgaaaccctcacaaaat atagtggatttcccatcgcaggaaggatgtaatccgacaggaagcttagcggcagacatagaagaatttcagtctcagat ggaggctgacctattagcagattccttcacgatgtcacaaggaaaatcaactagtacagacagcatggaagtatgtaatg tggcaccttgtgttaactttggtcgccatgtggtgacggcagtgaacactctacaagatcacagactggaacttgagctg aaagattacaacagtggagagaggaggacctgtatactgggtggattctggtctgatacccatgtgtttgagggtgacat tgtccatatcctggctaattttgatgaaggcggagtctgtaatattaatgacaaggacgggcttatcattgtgaaccctg acctcttgttgtcagggacaacggttgtgtccagtgttttctgtatgagaaagtccgtcttgaatgaaaaatttaagggt attgacaagggtaatgtacagatgttgtacggcagtattattcatcaagtctttcagcaggttttgaggaaacatatttt tgaagaagataagatcttgaaagaagcggaagaaactgttaaacaactcaaatttctacacgatatgtacgggagtaatg ttatagagagtgaagttttagaagagatcaaaaagtacatcccttccttacagaaatggttacaacagtacactaccatc ggcaaaaatatcctaggggctcagaggaaggctgatagtgacattgcgatactcaaggtcaaggacatcgaggagaatat ctggtcgccaagatatggggtaaaaggaaaaatagatttaacagtggaggtcaaggtcttattatacagtatgatgagtt cagataggagagatgacccaggtcaaggtcttttgttgtaccttaaagaacctgacatgaaggtcgtatcagctgatcat ctcaataagagaggtttactccaattacgcaatgagatggcctattacctcagcagacaggtgttgaaatcctgtgatat gggctctaactcgtacacacttggaagattacctgaacctatcaacaacccaagggcatgtagcaagtgtcctcagcttc ttaattgttctctttatcagaaagctatagagcagagagagcattcacccagtcataccatggctacattagttcccgag acactggcacatcttacacaggaccaccttgactacttcacacactggtgtttgttattagacctagagatgaaaagtgg tctaaaacatggagggctcaaagacatatggtgtaaatctggaaaagagagggaagatttgggagaagctattagtggac tgacattggaccattcacagcttattgaagatgacagtgaacagatcttcattaaatttcatagggagaagagtttatca agttgcggtctggggaaacacgattacgttattgtatcgagtgagaacacatcacacatagctgtatgtatgggtaccat tacgaaaattacagataccgacgttgtactactgacagaaagggaaactctaccaaggctgagggagctaagtagtgcgg tatatagaatcgacaaatatgacggttacaatacgtcatccatactgtactgtaatctatctaatatactccaggatcaa cccaactgttgcagattaagagaattgattataggaaagaggaaaccagagtttgttaacaaaatgtcaaaaggagaaat tgaaaaaggaagcacgtactgttccctcttaatatag |
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Protein
| Protein ID | pfu_aug2.0_4240.1_02590.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4240.1_02590.t1 QEEGQKKISSFFQKGGTKPVSSSLFTTTGNSNSNGGSKLTLKKPTNGKTRYTETKERDKDSGCKQVNSGKNADVQAGDSR SEPIVIPETQCFKSPLHPRPCDKSVNEDLNDSIIIPGTPEETNKIDGVKGRKCFSRSFLTSASSVTQRPGKHVAKEQLKK VSQARKSLLSVSVKFDQSSVKDEMNQGSEKGINGNQGKSCLQGEQPVMESENIPHTLFANLEGNNESQSVIENMESSEVI ESEKNGITRQSEGHSASNSDIRSLMIKKYEEKFSDEKENIELEKATPTKIYDGKCMKRMSKTGTSPNSKRSLSTDCKNLE MEKDGNDSDSSGFELSFDEDDKEETVNKNKKKMDEVEGARRSLKEFEKKTRKTKIRPNASAVNNYQLMMHRPNVRKSVVE TKDDELLSELLGEINTSTNRGSAEKRPGAMNRRKSLNKTKYVGDVKTDLSVGITDDEKKYFECLDTEIHNDMTQLDKNDT KSSIGTVLPTKPVILKKCFKNKSPKFDKTNSVASVSSSDIKKNVQKHSDMRLNDTEDSEIDDSVTQNSNSDKGVVKPSQN IVDFPSQEGCNPTGSLAADIEEFQSQMEADLLADSFTMSQGKSTSTDSMEVCNVAPCVNFGRHVVTAVNTLQDHRLELEL KDYNSGERRTCILGGFWSDTHVFEGDIVHILANFDEGGVCNINDKDGLIIVNPDLLLSGTTVVSSVFCMRKSVLNEKFKG IDKGNVQMLYGSIIHQVFQQVLRKHIFEEDKILKEAEETVKQLKFLHDMYGSNVIESEVLEEIKKYIPSLQKWLQQYTTI GKNILGAQRKADSDIAILKVKDIEENIWSPRYGVKGKIDLTVEVKVLLYSMMSSDRRDDPGQGLLLYLKEPDMKVVSADH LNKRGLLQLRNEMAYYLSRQVLKSCDMGSNSYTLGRLPEPINNPRACSKCPQLLNCSLYQKAIEQREHSPSHTMATLVPE TLAHLTQDHLDYFTHWCLLLDLEMKSGLKHGGLKDIWCKSGKEREDLGEAISGLTLDHSQLIEDDSEQIFIKFHREKSLS SCGLGKHDYVIVSSENTSHIAVCMGTITKITDTDVVLLTERETLPRLRELSSAVYRIDKYDGYNTSSILYCNLSNILQDQ PNCCRLRELIIGKRKPEFVNKMSKGEIEKGSTYCSLLI |
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